Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597409

Identifier: 120597409

GI number: 120597409

Start: 635520

End: 635960

Strand: Direct

Name: 120597409

Synonym: Sputw3181_0578

Alternate gene names: NA

Gene position: 635520-635960 (Clockwise)

Preceding gene: 120597408

Following gene: 120597410

Centisome position: 13.5

GC content: 46.03

Gene sequence:

>441_bases
ATGCATAACGTGATTCGTCAAAGTGTAAGCCGAACATTGATGGTGTTGGCCTTAGGCGTGATAGCCCTGCCAGTGATAGC
TGGTGGAGGTTCTGAAATGTCTGAAGTGCCCTATAACGAAATCCAATTAAATCCTATTTCGATGATGGAAGCGGAGACCT
TGGTTGGCAAGCAAGGTGTTTATTTTTTCGACGTAAATACGCTGGAGATATGGGCAGAAGGTTTTATCCCCGGAGCGGTT
TTTTTCAATGTTCAGAATTGGAGAGAGTTACTTCCAAAGAATAAAGATGCGGTCATGGTGTTTTACTGCGCTAACCGCCT
TTGCACCACCAGCAATATGGCGGCGAGAGAAACCATGAAGCTAGGTTACACCGGTGTGCGTCATATGGCCGATGGTATTT
ATGGCTGGCGTATGTCTGGGCGAGTAACAGAAAAACCTTAG

Upstream 100 bases:

>100_bases
TTATTGATGGTAAGGCGCTGAGTGCGAAGAAAATATAATTTAACTTGAGTCCTAGTTATCCCCGACACCTTAGGGTGTCG
GGGAATATGAGAGCCTAATT

Downstream 100 bases:

>100_bases
TAACACACAAGGCCGATGTTTTATCGGTTTGGTTTGCAGGGCCAAAAGGCGAAACCCACAGGGTTAACATTGTAGAGAAC
ATAATATGAAAACACGTATA

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Cytochrome C Family Protein; Rhodanese-Like Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHNVIRQSVSRTLMVLALGVIALPVIAGGGSEMSEVPYNEIQLNPISMMEAETLVGKQGVYFFDVNTLEIWAEGFIPGAV
FFNVQNWRELLPKNKDAVMVFYCANRLCTTSNMAARETMKLGYTGVRHMADGIYGWRMSGRVTEKP

Sequences:

>Translated_146_residues
MHNVIRQSVSRTLMVLALGVIALPVIAGGGSEMSEVPYNEIQLNPISMMEAETLVGKQGVYFFDVNTLEIWAEGFIPGAV
FFNVQNWRELLPKNKDAVMVFYCANRLCTTSNMAARETMKLGYTGVRHMADGIYGWRMSGRVTEKP
>Mature_146_residues
MHNVIRQSVSRTLMVLALGVIALPVIAGGGSEMSEVPYNEIQLNPISMMEAETLVGKQGVYFFDVNTLEIWAEGFIPGAV
FFNVQNWRELLPKNKDAVMVFYCANRLCTTSNMAARETMKLGYTGVRHMADGIYGWRMSGRVTEKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16296; Mature: 16296

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNVIRQSVSRTLMVLALGVIALPVIAGGGSEMSEVPYNEIQLNPISMMEAETLVGKQGV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCE
YFFDVNTLEIWAEGFIPGAVFFNVQNWRELLPKNKDAVMVFYCANRLCTTSNMAARETMK
EEEECCHHEEEECCCCCCEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
LGYTGVRHMADGIYGWRMSGRVTEKP
HCCHHHHHHHCCCCEEEECCEECCCC
>Mature Secondary Structure
MHNVIRQSVSRTLMVLALGVIALPVIAGGGSEMSEVPYNEIQLNPISMMEAETLVGKQGV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCE
YFFDVNTLEIWAEGFIPGAVFFNVQNWRELLPKNKDAVMVFYCANRLCTTSNMAARETMK
EEEECCHHEEEECCCCCCEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
LGYTGVRHMADGIYGWRMSGRVTEKP
HCCHHHHHHHCCCCEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA