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The map label for this gene is ydiK [H]

Identifier: 120597402

GI number: 120597402

Start: 627438

End: 628520

Strand: Direct

Name: ydiK [H]

Synonym: Sputw3181_0571

Alternate gene names: 120597402

Gene position: 627438-628520 (Clockwise)

Preceding gene: 120597401

Following gene: 120597408

Centisome position: 13.33

GC content: 47.37

Gene sequence:

>1083_bases
ATGACACCGATTTTCAGTAATGCCGCAATTGGTCGAACTCTGTTGATTTTGCTCTTATGTGCCGGTGTATTCTTTTTTAT
CGACTTTTTAGTCCCCGCCTTAGCTGCCTTGATTGTGTGTTTTTCGAGTTGGCCGCTTTATCAAAAACTGTTGGCAAAAT
GCCGTGGTCGTTCAGCGTTGGCGGCGACGATTGCTTTGGTGCTGATTGTATTAGGGTTGGTTATCCCGCTTGCGTTCGTT
TTTTCCTATGCTTTACATGAAATTAGGGGCTGGGTTGAGTGGCTCGTCCACACGAATCAGCATGGTGCTGCTGTGCCTGT
CTGGATCAAAGAATTACCTTTGATAGGAGAGTGGCTCACCCTGCAATGGCACGAGTTTATCGGTGAACCCCACGAGTTGG
GTAAAATAATCAGCGCCATCAGTGGTCAAAATTTAAGTGGTATTTCCCGTTGGGTACTGCAATTGGGCTGGAACACCTTA
GGGCTGTTACTGACCTTACTTTTTATGCTGATCACTTTGTTTTTCTTATATAAAGATGGCGAACATGTTGCGAAACAGCT
CGATATTGTGGGTGAACGTGTTTTGCCTGCCCGTTGGCACAGTTTTTCCCGCGTGGTGCCTGCAACGGTTAGTTCTACCG
TGATAGGTATGACGCTTATTGCCATTGGTGAGGGCATAGTGCTCGGTATTGCCTATTGGATTGCGGGTGTACCTTCGGCT
GTGGCTTTTGGGGTGTTAACCGCATTTATGGCGCTGATCCCCGGCGGTGCGCCCACTATGTTTACCTTGATTTCACTCTA
TCTTGTCGGCACTGGTGATATGACCGCCGGAGTCGGTTTATTCCTTTGGGGCAGTATAGAGCTGTTTATTGTCGATAAAA
CCCTAAGGCCAAATCTTGTTGGTGGGCCGATTAAATTACCTTTCTTACCGACTTTTTTCGGTCTGATCGGTGGGGTGAAA
ACCATGGGGTTTGTTGGTTTATTTGTCGGTCCAGTACTGATGGCCTTGCTGGTAGCCATTTGGCGGGAATGGCTAAGGGA
AGAACCTGAAACGATACCAATGGACAAACAGGCAGAAAGCTAA

Upstream 100 bases:

>100_bases
GGGATTTGGTTGAGTGCAGAAGTGTCATAAAATCTGCTTTCTAGAAATAGAATATCAAACCTATGAGTTAATGCTTTGAA
GTAAAGGATACAGTTTAGTT

Downstream 100 bases:

>100_bases
GGCTCAATTTGCTGCTAAGGTATTTTTCCGCTCATCGGTGTAATTCCACCAAGGCTTAGGATCATCACCCGCCATAAAAC
GGGTGATGGAGATAAACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTPIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAATIALVLIVLGLVIPLAFV
FSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQWHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTL
GLLLTLLFMLITLFFLYKDGEHVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
VAFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVK
TMGFVGLFVGPVLMALLVAIWREWLREEPETIPMDKQAES

Sequences:

>Translated_360_residues
MTPIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAATIALVLIVLGLVIPLAFV
FSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQWHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTL
GLLLTLLFMLITLFFLYKDGEHVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
VAFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVK
TMGFVGLFVGPVLMALLVAIWREWLREEPETIPMDKQAES
>Mature_359_residues
TPIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAATIALVLIVLGLVIPLAFVF
SYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQWHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLG
LLLTLLFMLITLFFLYKDGEHVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV
AFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVKT
MGFVGLFVGPVLMALLVAIWREWLREEPETIPMDKQAES

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=318, Percent_Identity=24.8427672955975, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39276; Mature: 39144

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
AATIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHH
LQWHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDG
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
EHVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
VAFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCC
GGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPETIPMDKQAES
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
AATIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHH
LQWHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDG
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
EHVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
VAFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCC
GGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPETIPMDKQAES
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]