Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597401

Identifier: 120597401

GI number: 120597401

Start: 626303

End: 627367

Strand: Direct

Name: 120597401

Synonym: Sputw3181_0570

Alternate gene names: NA

Gene position: 626303-627367 (Clockwise)

Preceding gene: 120597400

Following gene: 120597402

Centisome position: 13.3

GC content: 50.8

Gene sequence:

>1065_bases
ATGCCGTGCCAGTTAACCCGACTATTTGGAATTGAGTTACCCATTATCCAAGCGCCGATGGCGGGTGTCCAAGGCAGTGC
CTTAACGATTGCGGTATCACAGGCGGGCGCGTTGGGATCTTTGCCCTGTGCAATGTTATCCCTTGAGACATTAGATGCAG
AACTTAGCCTGATCCGTAGCCACACAACTAAACCCATTAACGTAAACTTCTTTTGTCACCACGAACCTGAACCGCAAGCG
GCGAAACAAGCCGCATGGCTTAAACAACTCACCCCTTATTTTACTGAATTGGGTATCCATCCTGATACCCAAGCTGCGGG
AGCACAACGTGCGCCATACACGAGTGCTCAGGCAGAAGTGTTAGCTAAATTTAAGCCCGAAGTTGTGAGTTTTCATTTTG
GTTTACCGAATGAAGACTTGTTGCTGGAGATTAAATCTTGGGGTTCCAAGGTTATTTCCACCGCAACCACTTTAGAAGAA
GCCTTATGGTTAGAAGCGCGTGGGGTAGATGCCATTATTGCTCAGGGTTTAGAGGCTGGGGGGCACAGGGGGCATTTCCT
ATCGGACGATCTCACCGAGCAGCTTGGTACTTTTGCTTTATTGCCACAGATTATTGCCGCCGTTGATGTACCTGTTATCG
CCGCGGGCGGGATAGTCGATGCTAAAACGGTGCGCGCTGCGATGGCAATGGGCGCGTCGGCGGTGCAAGTGGGTACGGCC
TATTTACTCTGTCCTGAATGCACTACCACTAAAATTCACCGCGCAGTACTGCAAAGTGAGACTGCGCAACATACGGCGCT
CACTAATTTATTTTCTGGCCGCCCTGCCCGCGGTATTGTAAACCGTTTTATGGCCGAACTTGGGCCTATCAATAGTGCGG
TACCGGATTTTCCGCTTGCTTCGAATGCTATCGCTGGATTGCGAAGCGCCGCTGAACAACAGGGATTTGGCGATTTTAGT
CCGCTCTGGTGCGGCCAAAATGCAACTGGCTGTCAGGCGATTCCCGCCGCAGAGCTTACAAAACAATTGGCGTTGGGGAT
TTGGTTGAGTGCAGAAGTGTCATAA

Upstream 100 bases:

>100_bases
GCTGATTATCTAATCTAAACGTTTGTCGTTCACGATTTTTGTTTACGGCTAAGGCTAAGTTGTTCAGTTTTATCAGGAGC
ACTATCAAAGGAGGTGATGT

Downstream 100 bases:

>100_bases
AATCTGCTTTCTAGAAATAGAATATCAAACCTATGAGTTAATGCTTTGAAGTAAAGGATACAGTTTAGTTATGACACCGA
TTTTCAGTAATGCCGCAATT

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQA
AKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEE
ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFS
PLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS

Sequences:

>Translated_354_residues
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQA
AKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEE
ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFS
PLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS
>Mature_353_residues
PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQAA
KQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEA
LWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTAY
LLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFSP
LWCGQNATGCQAIPAAELTKQLALGIWLSAEVS

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=323, Percent_Identity=30.9597523219814, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 37338; Mature: 37207

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRS
CCCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
HTTKPINVNFFCHHEPEPQAAKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEALWLEARGVDAIIAQGLEAG
HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE
YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
SNAIAGLRSAAEQQGFGDFSPLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS
HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure 
PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRS
CCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
HTTKPINVNFFCHHEPEPQAAKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEALWLEARGVDAIIAQGLEAG
HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE
YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
SNAIAGLRSAAEQQGFGDFSPLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS
HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA