Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597401
Identifier: 120597401
GI number: 120597401
Start: 626303
End: 627367
Strand: Direct
Name: 120597401
Synonym: Sputw3181_0570
Alternate gene names: NA
Gene position: 626303-627367 (Clockwise)
Preceding gene: 120597400
Following gene: 120597402
Centisome position: 13.3
GC content: 50.8
Gene sequence:
>1065_bases ATGCCGTGCCAGTTAACCCGACTATTTGGAATTGAGTTACCCATTATCCAAGCGCCGATGGCGGGTGTCCAAGGCAGTGC CTTAACGATTGCGGTATCACAGGCGGGCGCGTTGGGATCTTTGCCCTGTGCAATGTTATCCCTTGAGACATTAGATGCAG AACTTAGCCTGATCCGTAGCCACACAACTAAACCCATTAACGTAAACTTCTTTTGTCACCACGAACCTGAACCGCAAGCG GCGAAACAAGCCGCATGGCTTAAACAACTCACCCCTTATTTTACTGAATTGGGTATCCATCCTGATACCCAAGCTGCGGG AGCACAACGTGCGCCATACACGAGTGCTCAGGCAGAAGTGTTAGCTAAATTTAAGCCCGAAGTTGTGAGTTTTCATTTTG GTTTACCGAATGAAGACTTGTTGCTGGAGATTAAATCTTGGGGTTCCAAGGTTATTTCCACCGCAACCACTTTAGAAGAA GCCTTATGGTTAGAAGCGCGTGGGGTAGATGCCATTATTGCTCAGGGTTTAGAGGCTGGGGGGCACAGGGGGCATTTCCT ATCGGACGATCTCACCGAGCAGCTTGGTACTTTTGCTTTATTGCCACAGATTATTGCCGCCGTTGATGTACCTGTTATCG CCGCGGGCGGGATAGTCGATGCTAAAACGGTGCGCGCTGCGATGGCAATGGGCGCGTCGGCGGTGCAAGTGGGTACGGCC TATTTACTCTGTCCTGAATGCACTACCACTAAAATTCACCGCGCAGTACTGCAAAGTGAGACTGCGCAACATACGGCGCT CACTAATTTATTTTCTGGCCGCCCTGCCCGCGGTATTGTAAACCGTTTTATGGCCGAACTTGGGCCTATCAATAGTGCGG TACCGGATTTTCCGCTTGCTTCGAATGCTATCGCTGGATTGCGAAGCGCCGCTGAACAACAGGGATTTGGCGATTTTAGT CCGCTCTGGTGCGGCCAAAATGCAACTGGCTGTCAGGCGATTCCCGCCGCAGAGCTTACAAAACAATTGGCGTTGGGGAT TTGGTTGAGTGCAGAAGTGTCATAA
Upstream 100 bases:
>100_bases GCTGATTATCTAATCTAAACGTTTGTCGTTCACGATTTTTGTTTACGGCTAAGGCTAAGTTGTTCAGTTTTATCAGGAGC ACTATCAAAGGAGGTGATGT
Downstream 100 bases:
>100_bases AATCTGCTTTCTAGAAATAGAATATCAAACCTATGAGTTAATGCTTTGAAGTAAAGGATACAGTTTAGTTATGACACCGA TTTTCAGTAATGCCGCAATT
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQA AKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEE ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFS PLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS
Sequences:
>Translated_354_residues MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQA AKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEE ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFS PLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS >Mature_353_residues PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRSHTTKPINVNFFCHHEPEPQAA KQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEA LWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTAY LLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLASNAIAGLRSAAEQQGFGDFSP LWCGQNATGCQAIPAAELTKQLALGIWLSAEVS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=323, Percent_Identity=30.9597523219814, Blast_Score=140, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37338; Mature: 37207
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRS CCCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HTTKPINVNFFCHHEPEPQAAKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEV CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEALWLEARGVDAIIAQGLEAG HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC SNAIAGLRSAAEQQGFGDFSPLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECC >Mature Secondary Structure PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLETLDAELSLIRS CCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HTTKPINVNFFCHHEPEPQAAKQAAWLKQLTPYFTELGIHPDTQAAGAQRAPYTSAQAEV CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKVISTATTLEEALWLEARGVDAIIAQGLEAG HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GHRGHFLSDDLTEQLGTFALLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE YLLCPECTTTKIHRAVLQSETAQHTALTNLFSGRPARGIVNRFMAELGPINSAVPDFPLA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC SNAIAGLRSAAEQQGFGDFSPLWCGQNATGCQAIPAAELTKQLALGIWLSAEVS HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA