Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947093
Identifier: 119947093
GI number: 119947093
Start: 4319945
End: 4321243
Strand: Reverse
Name: 119947093
Synonym: Ping_3491
Alternate gene names: NA
Gene position: 4321243-4319945 (Counterclockwise)
Preceding gene: 119947094
Following gene: 119947092
Centisome position: 94.77
GC content: 38.65
Gene sequence:
>1299_bases ATGAAACGTTGTTTTGTCACTGGCGCTTTTATACTGGGTTTATTAGGTTTTTTATTACTCCTTTTTATCCGTTTTTTTGA TATCAATGCGCATCGGGGGTTTATCAGCAAACAGATAGAACAGTTAAGCGGCTATCAGGTTAATTTTGAGTCAGTTGATA GTCACCTATTTTCTGATTACTCAGTTTCACTTTCTGGCCTGTCTTTGACAATCGCTAACCGGCAAGTATTTTATGTCGAT AAAGTGAAGGTTAACCTCACTAAGCTTAATCTCTGGCAAAGGCAGTTAAAACTTGGCGAAGTACAATTAACCGGAGTGCG CATTTCAGGTGATACTGCTGCTTTTATTAATACTGCCGATGTTAAAATTGTGGAGAATAGCAACAGTGTTCAGCAAACGG CGGAGGTACAAATCCAGAAAAAACTAGCCTGGCAGCGGCTGACTATCAGCAGATTTTCGGTTAACGATTTAAAGATAGAA TTTACTCACGCAGGGCAAAGAGTGGTGCTTGATGGTGCTGATTTTACGTCAGATAATCTGCAGATTATAGCCGATCACAA GCTCGTAAAAATGCCTTTTTCTGGTAACTTAAAGCTGCTGGCAAGAGAGTTTACTGCACAGCCTACAGCCAGTAAAACAC TTACTGTTAAAAATCTTCAATTGACTGCGTCTTTTAATTTAAAAAATTTACAAGCGAATCTCAGTTTTAAAGCAGGGTCA CTCAATCTCGCTTTCGGGCCGGAGGAGGTTGCACTGCAAAATACAGAGCTTGTCGCTGAGCTTAATAATAATAAAGCCAG CATAACAAAGTTAACCAGCCAAATATTCTCCGGGCAGTTACAACTTCAAGCAGAGGCCTTATTTTTAATAAAGCCGTTAT CTTCACCTTTTCTATCAGTTCAACAGTTAACGGTGCAAAAGTTGGCCATTAAAAATATGAATGTCGTTATCCCCGCTGTG TTTAAGGATTCTGGCGCGGTTAAAAAAAATAAACTGCTATTTCCGATTACCAACCTTCTATTAAAGGAGCTTATTGTCAA AAATGTCAATATCCGCAGTGATAATTCGACAATTCCTTTAGTGATAAATAATTTAAATGCAGCAGTGACCGATTTCGTTT TACTACAGAATAAACAGCTGCAAGGTTTAGCTGAAGAAAAAAAACAAGCCGGATCCTTTGCTGTGCAGTTTGATTATTTA CGGTGGATGGAAAGCAATATTGAGCAGTTTGAAATTTCAGGCAAACTGTCGCAAGATGATGACGGTGCTTTGCTGATAAA AAAACTATTAGCGGAATAA
Upstream 100 bases:
>100_bases GGATAAGGATCGTTATGTTCATGCCTAGCCATAGCGGCAGTCTTGAAAAATTAGCGGGTAAAAAAAAGTACTTGCTGCAA TATGTCGTTAGGAGAAGGAG
Downstream 100 bases:
>100_bases AAAGCTGTTTATAAAATAACCCATTGTTTATAAAATGACTTGTTGCTTATAAAACAACCGGTTGTTCATAAAGTAACCTA TTGTTTGTTATGTAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFESVDSHLFSDYSVSLSGLSLTIANRQVFYVD KVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFINTADVKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIE FTHAGQRVVLDGADFTSDNLQIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKNLQANLSFKAGS LNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFLIKPLSSPFLSVQQLTVQKLAIKNMNVVIPAV FKDSGAVKKNKLLFPITNLLLKELIVKNVNIRSDNSTIPLVINNLNAAVTDFVLLQNKQLQGLAEEKKQAGSFAVQFDYL RWMESNIEQFEISGKLSQDDDGALLIKKLLAE
Sequences:
>Translated_432_residues MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFESVDSHLFSDYSVSLSGLSLTIANRQVFYVD KVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFINTADVKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIE FTHAGQRVVLDGADFTSDNLQIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKNLQANLSFKAGS LNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFLIKPLSSPFLSVQQLTVQKLAIKNMNVVIPAV FKDSGAVKKNKLLFPITNLLLKELIVKNVNIRSDNSTIPLVINNLNAAVTDFVLLQNKQLQGLAEEKKQAGSFAVQFDYL RWMESNIEQFEISGKLSQDDDGALLIKKLLAE >Mature_432_residues MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFESVDSHLFSDYSVSLSGLSLTIANRQVFYVD KVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFINTADVKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIE FTHAGQRVVLDGADFTSDNLQIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKNLQANLSFKAGS LNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFLIKPLSSPFLSVQQLTVQKLAIKNMNVVIPAV FKDSGAVKKNKLLFPITNLLLKELIVKNVNIRSDNSTIPLVINNLNAAVTDFVLLQNKQLQGLAEEKKQAGSFAVQFDYL RWMESNIEQFEISGKLSQDDDGALLIKKLLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48079; Mature: 48079
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFESVDSHLFSDY CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCC SVSLSGLSLTIANRQVFYVDKVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFINTAD EEEEECEEEEEECCEEEEEEEEEEEEEEEHHHHHHHCCCEEEEEEEEECCCCEEEEEECE VKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIEFTHAGQRVVLDGADFTSDNL EEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCCE QIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKNLQANLSFKAGS EEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECEEEEEEEEEEECCE LNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFLIKPLSSPFLSV EEEEECCHHHEECCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHH QQLTVQKLAIKNMNVVIPAVFKDSGAVKKNKLLFPITNLLLKELIVKNVNIRSDNSTIPL HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCEECCCCCEEEE VINNLNAAVTDFVLLQNKQLQGLAEEKKQAGSFAVQFDYLRWMESNIEQFEISGKLSQDD EEECCCHHHHHEEEECCCHHCCHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCC DGALLIKKLLAE CCHHHHHHHHCC >Mature Secondary Structure MKRCFVTGAFILGLLGFLLLLFIRFFDINAHRGFISKQIEQLSGYQVNFESVDSHLFSDY CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCC SVSLSGLSLTIANRQVFYVDKVKVNLTKLNLWQRQLKLGEVQLTGVRISGDTAAFINTAD EEEEECEEEEEECCEEEEEEEEEEEEEEEHHHHHHHCCCEEEEEEEEECCCCEEEEEECE VKIVENSNSVQQTAEVQIQKKLAWQRLTISRFSVNDLKIEFTHAGQRVVLDGADFTSDNL EEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCEEEEECCCCCCCCE QIIADHKLVKMPFSGNLKLLAREFTAQPTASKTLTVKNLQLTASFNLKNLQANLSFKAGS EEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECEEEEEEEEEEECCE LNLAFGPEEVALQNTELVAELNNNKASITKLTSQIFSGQLQLQAEALFLIKPLSSPFLSV EEEEECCHHHEECCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHH QQLTVQKLAIKNMNVVIPAVFKDSGAVKKNKLLFPITNLLLKELIVKNVNIRSDNSTIPL HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCEECCCCCEEEE VINNLNAAVTDFVLLQNKQLQGLAEEKKQAGSFAVQFDYLRWMESNIEQFEISGKLSQDD EEECCCHHHHHEEEECCCHHCCHHHHHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCC DGALLIKKLLAE CCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA