Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is ansA [H]
Identifier: 119946999
GI number: 119946999
Start: 4195300
End: 4196310
Strand: Reverse
Name: ansA [H]
Synonym: Ping_3394
Alternate gene names: 119946999
Gene position: 4196310-4195300 (Counterclockwise)
Preceding gene: 119947001
Following gene: 119946998
Centisome position: 92.03
GC content: 41.64
Gene sequence:
>1011_bases ATGGCACATAAAAAAAGAATTTATATCGCATACACAGGCGGCACCATTGGCATGAAACCCTCAAAAGAAGGCTTCATTCC GGTAGCAGGTTATCTTTCAAAAACCATTGCTAATATGCCGGAGTTTTATCATAGCCAAATGCCTGATTTTGAGATTCATG AATATGATCCGTTGATTGATTCAGCCAATGTATCCCCTTCTGTCTGGCAGGATCTTGCGCAGGATATTCAAGCGCGTTAC CACGACTTTGATGGTTTTATTATTCTCCATGGTACCGATACCATGGCTTATACCGCTTCGGCATTATCCTTTGTATTTGA AAATTTATCCAAGCCAGTGATTGTGACGGGATCACAAATTCCATTGTCACAATTACGTTCCGATGCGCGCGCTAATTTAT TAAACTCTTTGTATATTGCCGCGCATCATCCTATTAATGAAGTCTGTGTTTTTTTTAATAATCAATTGTTTCGCGGTAAC CGTGCAAGCAAACAACATGCCGATGGATTTAGTGCTTTTGTTTCTCCTAACCACCCAGTTTTGCTGGAAGCAGGGATTGA AATCAAGAATATTGCCGGTATTACCCAAAAAGCGGTTAATACCCGTTTACGCATTACTGATATTCGTGCGCATTCGATTG CCATTCTGCACCTTTTCCCCGGCTTAGATTGGAATATTCTGGATACTTTATTAAAAAGCCCATTAAAGGCACTTGTACTG TTAACCTATGGGGTGGGAAATGCGCAGCAAGATGAGCAATTATTAGCGATTCTAAAAGAAGCCACGGATCGTGGTATTTT AATTGTTAATTGCAGTCAGTGTTTAAAAGGCAGCGTGAATATGGAGGGTTATGCCACCGGGCATGCACTGAGTGAGGCGG GCGTTATCAGCGGGCTGGATATGACCACAGAAACCGTTATTGCCAAGCTATATTATCTGCTCAGTCAAGAGTTACCAACG AAAGTGATTCGTGAATTGTTAGGGACTAATCTGCGCGGTGAATTAACTTAA
Upstream 100 bases:
>100_bases TAGAATTAGACAGATAAAAACAGTCTGAATCTAATCGCTAAAAATGGTTTAAATGAGAACCTAAATGAAAACCTAAATGA AAACCTAAATGAGAAGTTAA
Downstream 100 bases:
>100_bases TTTATTGCATTTTGTACATAAAAAAACCAGCAATACTGCTTAATGCCGATCAGTTAAGAAAAATATATTGATTTTTAGCT GAACGAGATCAAAATCCGAT
Product: cytoplasmic asparaginase I
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAHKKRIYIAYTGGTIGMKPSKEGFIPVAGYLSKTIANMPEFYHSQMPDFEIHEYDPLIDSANVSPSVWQDLAQDIQARY HDFDGFIILHGTDTMAYTASALSFVFENLSKPVIVTGSQIPLSQLRSDARANLLNSLYIAAHHPINEVCVFFNNQLFRGN RASKQHADGFSAFVSPNHPVLLEAGIEIKNIAGITQKAVNTRLRITDIRAHSIAILHLFPGLDWNILDTLLKSPLKALVL LTYGVGNAQQDEQLLAILKEATDRGILIVNCSQCLKGSVNMEGYATGHALSEAGVISGLDMTTETVIAKLYYLLSQELPT KVIRELLGTNLRGELT
Sequences:
>Translated_336_residues MAHKKRIYIAYTGGTIGMKPSKEGFIPVAGYLSKTIANMPEFYHSQMPDFEIHEYDPLIDSANVSPSVWQDLAQDIQARY HDFDGFIILHGTDTMAYTASALSFVFENLSKPVIVTGSQIPLSQLRSDARANLLNSLYIAAHHPINEVCVFFNNQLFRGN RASKQHADGFSAFVSPNHPVLLEAGIEIKNIAGITQKAVNTRLRITDIRAHSIAILHLFPGLDWNILDTLLKSPLKALVL LTYGVGNAQQDEQLLAILKEATDRGILIVNCSQCLKGSVNMEGYATGHALSEAGVISGLDMTTETVIAKLYYLLSQELPT KVIRELLGTNLRGELT >Mature_335_residues AHKKRIYIAYTGGTIGMKPSKEGFIPVAGYLSKTIANMPEFYHSQMPDFEIHEYDPLIDSANVSPSVWQDLAQDIQARYH DFDGFIILHGTDTMAYTASALSFVFENLSKPVIVTGSQIPLSQLRSDARANLLNSLYIAAHHPINEVCVFFNNQLFRGNR ASKQHADGFSAFVSPNHPVLLEAGIEIKNIAGITQKAVNTRLRITDIRAHSIAILHLFPGLDWNILDTLLKSPLKALVLL TYGVGNAQQDEQLLAILKEATDRGILIVNCSQCLKGSVNMEGYATGHALSEAGVISGLDMTTETVIAKLYYLLSQELPTK VIRELLGTNLRGELT
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=356, Percent_Identity=40.7303370786517, Blast_Score=248, Evalue=8e-66, Organism=Escherichia coli, GI1788065, Length=334, Percent_Identity=58.3832335329341, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1789327, Length=234, Percent_Identity=27.3504273504274, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193207372, Length=362, Percent_Identity=41.7127071823204, Blast_Score=274, Evalue=5e-74, Organism=Caenorhabditis elegans, GI17558280, Length=362, Percent_Identity=41.7127071823204, Blast_Score=273, Evalue=7e-74, Organism=Caenorhabditis elegans, GI17558278, Length=362, Percent_Identity=41.7127071823204, Blast_Score=273, Evalue=8e-74, Organism=Caenorhabditis elegans, GI193207374, Length=362, Percent_Identity=41.7127071823204, Blast_Score=273, Evalue=9e-74, Organism=Drosophila melanogaster, GI24639609, Length=362, Percent_Identity=36.7403314917127, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI24645530, Length=367, Percent_Identity=37.3297002724796, Blast_Score=231, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 36995; Mature: 36864
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHKKRIYIAYTGGTIGMKPSKEGFIPVAGYLSKTIANMPEFYHSQMPDFEIHEYDPLID CCCCEEEEEEEECCEECCCCCCCCCEEHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCC SANVSPSVWQDLAQDIQARYHDFDGFIILHGTDTMAYTASALSFVFENLSKPVIVTGSQI CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCC PLSQLRSDARANLLNSLYIAAHHPINEVCVFFNNQLFRGNRASKQHADGFSAFVSPNHPV CHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCEECCCCCCCHHCCCCEEEECCCCCE LLEAGIEIKNIAGITQKAVNTRLRITDIRAHSIAILHLFPGLDWNILDTLLKSPLKALVL EEECCCCEEHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH LTYGVGNAQQDEQLLAILKEATDRGILIVNCSQCLKGSVNMEGYATGHALSEAGVISGLD HEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEECCCHHHHCCCCCCCC MTTETVIAKLYYLLSQELPTKVIRELLGTNLRGELT HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure AHKKRIYIAYTGGTIGMKPSKEGFIPVAGYLSKTIANMPEFYHSQMPDFEIHEYDPLID CCCEEEEEEEECCEECCCCCCCCCEEHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCC SANVSPSVWQDLAQDIQARYHDFDGFIILHGTDTMAYTASALSFVFENLSKPVIVTGSQI CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCC PLSQLRSDARANLLNSLYIAAHHPINEVCVFFNNQLFRGNRASKQHADGFSAFVSPNHPV CHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCEECCCCCCCHHCCCCEEEECCCCCE LLEAGIEIKNIAGITQKAVNTRLRITDIRAHSIAILHLFPGLDWNILDTLLKSPLKALVL EEECCCCEEHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH LTYGVGNAQQDEQLLAILKEATDRGILIVNCSQCLKGSVNMEGYATGHALSEAGVISGLD HEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEECCCHHHHCCCCCCCC MTTETVIAKLYYLLSQELPTKVIRELLGTNLRGELT HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]