Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946982

Identifier: 119946982

GI number: 119946982

Start: 4170752

End: 4171000

Strand: Reverse

Name: 119946982

Synonym: Ping_3377

Alternate gene names: NA

Gene position: 4171000-4170752 (Counterclockwise)

Preceding gene: 119946983

Following gene: 119946981

Centisome position: 91.48

GC content: 40.16

Gene sequence:

>249_bases
ATGGATATCACTCAGTTACTGTTTACCGCGTTGCAATTGTTAGGTCTAGGGATGGGTTTCGTCTTTCTGTTTTTAGGTTT
ATTAATGGTTATTGTCAATTTGATGGCAAAATACATTCCCCAAGAACAGCCCGTTGCTGATAAAAAAAGGGCTCAGCAAA
GCGCCACAGAATCTGCAATTAATCCCGCAATTATAGCCGCTATTACCACGGCTGTGCATCAATATCATAAAACTAAAACC
GCACAATAG

Upstream 100 bases:

>100_bases
GGGTTGATAGATAAAAAAAAATATTTTTGAATATTTATTCATTATAAGGCGTTTATTGAAATGTATCGACTAGATCAGTG
TAGAAAAGGATAGAAGAATT

Downstream 100 bases:

>100_bases
GAAATGAAAAATGAAGGAGCAAGTAAATATGTCTAAGCCTCTCGGCATCACTGAAGTTGTCCTACGCGATGCGCATCAAT
CATTATTTGCAACACGGATG

Product: oxaloacetate decarboxylase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT
AQ

Sequences:

>Translated_82_residues
MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT
AQ
>Mature_82_residues
MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT
AQ

Specific function: Unknown

COG id: COG3630

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8987; Mature: 8987

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
NPAIIAAITTAVHQYHKTKTAQ
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
NPAIIAAITTAVHQYHKTKTAQ
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA