Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119946938

Identifier: 119946938

GI number: 119946938

Start: 4116643

End: 4118235

Strand: Reverse

Name: 119946938

Synonym: Ping_3332

Alternate gene names: NA

Gene position: 4118235-4116643 (Counterclockwise)

Preceding gene: 119946939

Following gene: 119946937

Centisome position: 90.32

GC content: 46.2

Gene sequence:

>1593_bases
ATGAATACACTTAAGACAGATGACTGTTCCACGGAAAAGGACTCTTTGATCGATCACTATATGGCTGAGATTAGAAAGCG
CCTGCCGGTTGTAGACAAAACATTAGAATTGTACGGAGAACTGCTGCTGAGCGAATATCTTGATGTGGTGACTGAAACCG
CAAGCGAGCGCTACCAGTCAGCCGATGATCTGGCTGATGTTGTTTATGAATATGCCGCACCGCTGCTAGGTGAAAAAGTC
GCCGCAATGGCGCGGGAGGAGCTGAAACAGAGCCCAGTGGTATTGACGGCTAACCACCATGGTGTTGACTACTTTGCCCA
ATCGGTGCAGGGAACGCTGCTGTTCAGCCAGCGCAAACTGCCCAATGGCCAGAAAGCTAAGACAGTGCCAGTACTGGCCT
GTGGCGCTATTCCATTGAACAATATGACTTATCCGCGTGGGATGTTGTGTTATGATATAACTGAGTTTAAGCGGGCTGGA
ATCCCTATCCGCTTGCCCCTATTTCCAAAACGTCGACAAAACGAGACTGTCTCGTTGACAGGACCTTTTGAGAAAGGAGC
TGTTGAACGAGCGGAAAAGTCCACTCGTAAAATGGTGGGTGATCATTTAATCTCAGCTGCGACTGGCAAGGCGTTAATGT
CGGTGTTGGAAGATGAATATTCCAGCCCGAGAGTATTGGGCCTTTCTTCCTACTCAGAGCAAGCCGTTGTGATCAACAGC
CTGCTCTGGAAGCGGCTGTTTCACAATAGTGATACATCGCAGTTATTATATCTGGAGCAAGAAGAGATTGTTCGTATCTT
ATTGGTGCGTGATCTTAAATCGGAGACCTCTATGGCATCGCTGTTAATGCTAGATGTGGACTTTCTAAAAATACTGCTTG
CTAACCTAGATGATGCGCGAGGTTGTTGGCAATCCGAAGGGCTTGAAAGCCGTATCTTGTCTGCGGATTCTTTACGGATT
AATCCTACTAAATCTACAGGGAGTTTTCTCTTTTGGTGGATAGATGATGCAGGGCGAAGAGTCCCGCTTGTTTTGGATAA
AAGCTCTGATCTACTATGTTTAATAGGGATCAGCGAGTCAGGAGTGGAGCACAAGGTAGAGTTGACAGCAAACAACCTGA
TAGATAGCTTGGAGACTAAAAGGTTGATACCGTCTACCTTTACTTGTTTCTTAGTATTGGCTTTTGCTCGAGGTGTAACT
TGCGCGGGTGGTTATTATCAAGCCGATTATCTGCCAGTTATTCAGCAGGGGCTCGTAAAGTCTATCGAAGAGCATGGCAG
TCATATGTCGTTGATCCCATATATTCAGGGAATACCTACGGATAAATATTTGTCAGGTATGCAGACAGTTATGCGCAGAT
GGGAGCATGGTGCCTTACATCCAGCTGGCCCATTAGAAATGATAGCGTCAGAGATGTCGCTTAATGACCATATCAGTAAC
ATTGTTGAGATGACCGTACATGACGCACATAAAGCATCTTTGGTAGAAACTGTCGCTGATGCAGCTCCAGATCAAGTAAT
GTCTGAGGATTGGTATGCCCGGTTGGCAGATCAACTAGGAAGTTATTTTGCTGGCAACGTAGTAACTGTCTGA

Upstream 100 bases:

>100_bases
TATCTAGGGCTGGCATACATTGTTATGTCCCTTATTTTTATCTGGTTGACACGTAGTGATGCCGATCAACTAAAAAAAAT
ACAGGAAGGAACTTCGTAGT

Downstream 100 bases:

>100_bases
TCTAAGGTTGAGTACTTAGATAATTAGAAAGGCTCTACTCGTATAACAAAGTATTAATAGATCATAACCATAGGCGGAAT
TACCATGTATTGTATTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MNTLKTDDCSTEKDSLIDHYMAEIRKRLPVVDKTLELYGELLLSEYLDVVTETASERYQSADDLADVVYEYAAPLLGEKV
AAMAREELKQSPVVLTANHHGVDYFAQSVQGTLLFSQRKLPNGQKAKTVPVLACGAIPLNNMTYPRGMLCYDITEFKRAG
IPIRLPLFPKRRQNETVSLTGPFEKGAVERAEKSTRKMVGDHLISAATGKALMSVLEDEYSSPRVLGLSSYSEQAVVINS
LLWKRLFHNSDTSQLLYLEQEEIVRILLVRDLKSETSMASLLMLDVDFLKILLANLDDARGCWQSEGLESRILSADSLRI
NPTKSTGSFLFWWIDDAGRRVPLVLDKSSDLLCLIGISESGVEHKVELTANNLIDSLETKRLIPSTFTCFLVLAFARGVT
CAGGYYQADYLPVIQQGLVKSIEEHGSHMSLIPYIQGIPTDKYLSGMQTVMRRWEHGALHPAGPLEMIASEMSLNDHISN
IVEMTVHDAHKASLVETVADAAPDQVMSEDWYARLADQLGSYFAGNVVTV

Sequences:

>Translated_530_residues
MNTLKTDDCSTEKDSLIDHYMAEIRKRLPVVDKTLELYGELLLSEYLDVVTETASERYQSADDLADVVYEYAAPLLGEKV
AAMAREELKQSPVVLTANHHGVDYFAQSVQGTLLFSQRKLPNGQKAKTVPVLACGAIPLNNMTYPRGMLCYDITEFKRAG
IPIRLPLFPKRRQNETVSLTGPFEKGAVERAEKSTRKMVGDHLISAATGKALMSVLEDEYSSPRVLGLSSYSEQAVVINS
LLWKRLFHNSDTSQLLYLEQEEIVRILLVRDLKSETSMASLLMLDVDFLKILLANLDDARGCWQSEGLESRILSADSLRI
NPTKSTGSFLFWWIDDAGRRVPLVLDKSSDLLCLIGISESGVEHKVELTANNLIDSLETKRLIPSTFTCFLVLAFARGVT
CAGGYYQADYLPVIQQGLVKSIEEHGSHMSLIPYIQGIPTDKYLSGMQTVMRRWEHGALHPAGPLEMIASEMSLNDHISN
IVEMTVHDAHKASLVETVADAAPDQVMSEDWYARLADQLGSYFAGNVVTV
>Mature_530_residues
MNTLKTDDCSTEKDSLIDHYMAEIRKRLPVVDKTLELYGELLLSEYLDVVTETASERYQSADDLADVVYEYAAPLLGEKV
AAMAREELKQSPVVLTANHHGVDYFAQSVQGTLLFSQRKLPNGQKAKTVPVLACGAIPLNNMTYPRGMLCYDITEFKRAG
IPIRLPLFPKRRQNETVSLTGPFEKGAVERAEKSTRKMVGDHLISAATGKALMSVLEDEYSSPRVLGLSSYSEQAVVINS
LLWKRLFHNSDTSQLLYLEQEEIVRILLVRDLKSETSMASLLMLDVDFLKILLANLDDARGCWQSEGLESRILSADSLRI
NPTKSTGSFLFWWIDDAGRRVPLVLDKSSDLLCLIGISESGVEHKVELTANNLIDSLETKRLIPSTFTCFLVLAFARGVT
CAGGYYQADYLPVIQQGLVKSIEEHGSHMSLIPYIQGIPTDKYLSGMQTVMRRWEHGALHPAGPLEMIASEMSLNDHISN
IVEMTVHDAHKASLVETVADAAPDQVMSEDWYARLADQLGSYFAGNVVTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58914; Mature: 58914

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLKTDDCSTEKDSLIDHYMAEIRKRLPVVDKTLELYGELLLSEYLDVVTETASERYQS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADDLADVVYEYAAPLLGEKVAAMAREELKQSPVVLTANHHGVDYFAQSVQGTLLFSQRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEEECCCC
PNGQKAKTVPVLACGAIPLNNMTYPRGMLCYDITEFKRAGIPIRLPLFPKRRQNETVSLT
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCEECCCCCCCCCCCEEEEE
GPFEKGAVERAEKSTRKMVGDHLISAATGKALMSVLEDEYSSPRVLGLSSYSEQAVVINS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LLWKRLFHNSDTSQLLYLEQEEIVRILLVRDLKSETSMASLLMLDVDFLKILLANLDDAR
HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
GCWQSEGLESRILSADSLRINPTKSTGSFLFWWIDDAGRRVPLVLDKSSDLLCLIGISES
CCHHHCCHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCC
GVEHKVELTANNLIDSLETKRLIPSTFTCFLVLAFARGVTCAGGYYQADYLPVIQQGLVK
CCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHH
SIEEHGSHMSLIPYIQGIPTDKYLSGMQTVMRRWEHGALHPAGPLEMIASEMSLNDHISN
HHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IVEMTVHDAHKASLVETVADAAPDQVMSEDWYARLADQLGSYFAGNVVTV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC
>Mature Secondary Structure
MNTLKTDDCSTEKDSLIDHYMAEIRKRLPVVDKTLELYGELLLSEYLDVVTETASERYQS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADDLADVVYEYAAPLLGEKVAAMAREELKQSPVVLTANHHGVDYFAQSVQGTLLFSQRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEEECCCC
PNGQKAKTVPVLACGAIPLNNMTYPRGMLCYDITEFKRAGIPIRLPLFPKRRQNETVSLT
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCEECCCCCCCCCCCEEEEE
GPFEKGAVERAEKSTRKMVGDHLISAATGKALMSVLEDEYSSPRVLGLSSYSEQAVVINS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LLWKRLFHNSDTSQLLYLEQEEIVRILLVRDLKSETSMASLLMLDVDFLKILLANLDDAR
HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
GCWQSEGLESRILSADSLRINPTKSTGSFLFWWIDDAGRRVPLVLDKSSDLLCLIGISES
CCHHHCCHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCC
GVEHKVELTANNLIDSLETKRLIPSTFTCFLVLAFARGVTCAGGYYQADYLPVIQQGLVK
CCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHH
SIEEHGSHMSLIPYIQGIPTDKYLSGMQTVMRRWEHGALHPAGPLEMIASEMSLNDHISN
HHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IVEMTVHDAHKASLVETVADAAPDQVMSEDWYARLADQLGSYFAGNVVTV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA