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The map label for this gene is 119946937

Identifier: 119946937

GI number: 119946937

Start: 4115398

End: 4116558

Strand: Reverse

Name: 119946937

Synonym: Ping_3331

Alternate gene names: NA

Gene position: 4116558-4115398 (Counterclockwise)

Preceding gene: 119946938

Following gene: 119946936

Centisome position: 90.28

GC content: 43.5

Gene sequence:

>1161_bases
ATGTATTGTATTCGAAACGTTCTCTACATTTTTATTTGTGCTCTTATAAGTTTCACCAGCATAGCGGAGGCAGAAGATAA
GTCTTCTTTTAGCACCACCCCTGTATTAAATGATGGGAAGCATTGGCGTGTTGGCTATTACGAGGGGGGGGAGTATACCG
ATTACCAGAAGGAGTTTACCGCCACTATAAAGGGGTTAATGAAACTAGGCTGGATTGAGCTGCAAACTATTCCAGAGCAA
CCAGGAGAACGTACAGACCTTCTCTGGAAATGGTTGTCAACACAGATTAAGAGTGATTATATCGAGTTTGTTCCGGATGC
ATACTATTCAGCTGGTTGGGATGAAGAGCTCCGTAAGCAAAGTGCTGCAGCAGTGATTGATCGACTCAAGAATAAGCCGG
ATATTGATCTGATGATAGCCATGGGAACTTGGGCGGGTAAAGATTTGGCAAATGATCGTCATACAACCCCCACGTTGGTT
TTGTCTGCCAGTGATCCGCTAGCTGCTGGGATTATAAAAAGTGTCGAAGATTCAGGCTATAGCCACTTACATGCGGCTGT
TGATTTAGATCGGTTTGCTCGTCAGGTAAAACTCTTCCATGAGTTAGTAGGATTTAAAAATTTGGGGGTCGCTTTCGAAA
ACAGCGCTAGCGGCCGTAGTTATGCTGCGATTGATTCGATTGAAATACTGTCTAAGGAACGTGGCTTTGACATTATTCCC
TGTTATACGCAGAGTGATATCAGCGAAAAGGCGATAGCTGAAGCCAGCGTGATCTCTTGCTTTGAGCTTCTTGCTAAGAG
TGCTGAAGCAATATATGTTACCAATCAAGGAGGAGTGACTTATAATAGTATTCCAAAACTAGTAGAGATTGCCAATAAGC
ACCGGATACCAACATTCTCTCAGTCTGGTGCCGAGGAAGTTAAATATGGATTTTTATTGAGCCTGTCGCGCGCAGCATTT
CGTTATCTGGGTGATTTTCATGCTCTCACAATTGCTAAAGTCTTCAATGGTGCGAAACCTGGGCAATTGATTCAACTTTT
TGAGGAACCTCCAAAAGTGGCAGTGAATCTAAAAACAGCAAAAATCATCGGTTTTAATCCTCCGCTTCTTCTGCTTGGGG
CAGCTGATGAGATCTACCACGAAATCCAGAGCAGCCAATAA

Upstream 100 bases:

>100_bases
CGTAGTAACTGTCTGATCTAAGGTTGAGTACTTAGATAATTAGAAAGGCTCTACTCGTATAACAAAGTATTAATAGATCA
TAACCATAGGCGGAATTACC

Downstream 100 bases:

>100_bases
TATAAATAATCTGCGATTAATACTAGTGGCAGGCAGGAGTACAGAAAAATGAGGAAAAAAAAACAAGGCATTTTTATCTG
GTTAGTACTGTGCTGCAGTG

Product: ABC-type uncharacterized transport system, periplasmic component

Products: NA

Alternate protein names: ABC Transporter Periplasmic Protein; Outer Membrane Efflux Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MYCIRNVLYIFICALISFTSIAEAEDKSSFSTTPVLNDGKHWRVGYYEGGEYTDYQKEFTATIKGLMKLGWIELQTIPEQ
PGERTDLLWKWLSTQIKSDYIEFVPDAYYSAGWDEELRKQSAAAVIDRLKNKPDIDLMIAMGTWAGKDLANDRHTTPTLV
LSASDPLAAGIIKSVEDSGYSHLHAAVDLDRFARQVKLFHELVGFKNLGVAFENSASGRSYAAIDSIEILSKERGFDIIP
CYTQSDISEKAIAEASVISCFELLAKSAEAIYVTNQGGVTYNSIPKLVEIANKHRIPTFSQSGAEEVKYGFLLSLSRAAF
RYLGDFHALTIAKVFNGAKPGQLIQLFEEPPKVAVNLKTAKIIGFNPPLLLLGAADEIYHEIQSSQ

Sequences:

>Translated_386_residues
MYCIRNVLYIFICALISFTSIAEAEDKSSFSTTPVLNDGKHWRVGYYEGGEYTDYQKEFTATIKGLMKLGWIELQTIPEQ
PGERTDLLWKWLSTQIKSDYIEFVPDAYYSAGWDEELRKQSAAAVIDRLKNKPDIDLMIAMGTWAGKDLANDRHTTPTLV
LSASDPLAAGIIKSVEDSGYSHLHAAVDLDRFARQVKLFHELVGFKNLGVAFENSASGRSYAAIDSIEILSKERGFDIIP
CYTQSDISEKAIAEASVISCFELLAKSAEAIYVTNQGGVTYNSIPKLVEIANKHRIPTFSQSGAEEVKYGFLLSLSRAAF
RYLGDFHALTIAKVFNGAKPGQLIQLFEEPPKVAVNLKTAKIIGFNPPLLLLGAADEIYHEIQSSQ
>Mature_386_residues
MYCIRNVLYIFICALISFTSIAEAEDKSSFSTTPVLNDGKHWRVGYYEGGEYTDYQKEFTATIKGLMKLGWIELQTIPEQ
PGERTDLLWKWLSTQIKSDYIEFVPDAYYSAGWDEELRKQSAAAVIDRLKNKPDIDLMIAMGTWAGKDLANDRHTTPTLV
LSASDPLAAGIIKSVEDSGYSHLHAAVDLDRFARQVKLFHELVGFKNLGVAFENSASGRSYAAIDSIEILSKERGFDIIP
CYTQSDISEKAIAEASVISCFELLAKSAEAIYVTNQGGVTYNSIPKLVEIANKHRIPTFSQSGAEEVKYGFLLSLSRAAF
RYLGDFHALTIAKVFNGAKPGQLIQLFEEPPKVAVNLKTAKIIGFNPPLLLLGAADEIYHEIQSSQ

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42846; Mature: 42846

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCIRNVLYIFICALISFTSIAEAEDKSSFSTTPVLNDGKHWRVGYYEGGEYTDYQKEFT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
ATIKGLMKLGWIELQTIPEQPGERTDLLWKWLSTQIKSDYIEFVPDAYYSAGWDEELRKQ
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
SAAAVIDRLKNKPDIDLMIAMGTWAGKDLANDRHTTPTLVLSASDPLAAGIIKSVEDSGY
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
SHLHAAVDLDRFARQVKLFHELVGFKNLGVAFENSASGRSYAAIDSIEILSKERGFDIIP
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCCEEHHHHHHHHHHCCCCEEEE
CYTQSDISEKAIAEASVISCFELLAKSAEAIYVTNQGGVTYNSIPKLVEIANKHRIPTFS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCC
QSGAEEVKYGFLLSLSRAAFRYLGDFHALTIAKVFNGAKPGQLIQLFEEPPKVAVNLKTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEE
KIIGFNPPLLLLGAADEIYHEIQSSQ
EEEECCCCEEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MYCIRNVLYIFICALISFTSIAEAEDKSSFSTTPVLNDGKHWRVGYYEGGEYTDYQKEFT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
ATIKGLMKLGWIELQTIPEQPGERTDLLWKWLSTQIKSDYIEFVPDAYYSAGWDEELRKQ
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
SAAAVIDRLKNKPDIDLMIAMGTWAGKDLANDRHTTPTLVLSASDPLAAGIIKSVEDSGY
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
SHLHAAVDLDRFARQVKLFHELVGFKNLGVAFENSASGRSYAAIDSIEILSKERGFDIIP
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCCEEHHHHHHHHHHCCCCEEEE
CYTQSDISEKAIAEASVISCFELLAKSAEAIYVTNQGGVTYNSIPKLVEIANKHRIPTFS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCC
QSGAEEVKYGFLLSLSRAAFRYLGDFHALTIAKVFNGAKPGQLIQLFEEPPKVAVNLKTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEE
KIIGFNPPLLLLGAADEIYHEIQSSQ
EEEECCCCEEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA