Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946927
Identifier: 119946927
GI number: 119946927
Start: 4104202
End: 4104948
Strand: Reverse
Name: 119946927
Synonym: Ping_3321
Alternate gene names: NA
Gene position: 4104948-4104202 (Counterclockwise)
Preceding gene: 119946930
Following gene: 119946926
Centisome position: 90.03
GC content: 42.57
Gene sequence:
>747_bases ATGAAAAAACGAGATCAACGCGGCGATACACCATCCCTGGATATCAATGATCAGCTGAAGGTGAAAGAGATTGCTCACCC TTTTAGATTTGAAAAGTACAGCAAAGAAAATGAACTCACAGAATTGATTGTTGAGGCGGTAAATCGAATGGGCGGTTCGG GTGAATTGGCTGAAGAAAAATATCGCTTATGTGTTGACAAGTTATGCCGAAAATCGAAGCTCACCTCCCAAATTATCCAG GAAGAATACTTTGATTTGGCAGAAGATGCTTATCTTGATCGATGGGGATTGACTATGCTTGCTGTTGAGCTTCAGGATCA AAATGGATTGGCATTTTTTGATAAGATTTTGGCCGAAGAGATTCCAGAAGAAAAAAGTAAAGACCCTCATAGTTTTACCT CGGTTGGAGAGGAAGTGATGATACGTACTACCGCGATAGAAGGACTGGAACGGTTGGCGGCTAATGGCAATGATGATGCG ATTAAAGTTTTGTTCGGTAATATTAGTCATGAAGTTTTTTCAGTCCGTCGCGCCGCCACTCAAGCATTGTTAGCTGTTGG TGGTGAAAATATGCTGGAGAAACTCAAGAGCGAGTTACCCAAGCGGCATCATGATCTGTTAAAGATTAAGCGCACTGATG TTCGTAATGCAGAGCAGGCAGAAGGGGGATTATTTATTAGGAATCAGGATGATAGCGATATCCCTGCACCAAAAAGTGAC TCGTCAGCTAAACATTGTCGCGACTGA
Upstream 100 bases:
>100_bases ATCACAACATAATAAGAAAAAACGTCCTATTCAAATCCGCATTTTTTTTGTAAATGGCTTGTATGCTTCCTATACTCTTT ACACTACTGGAGGATAAATT
Downstream 100 bases:
>100_bases TCTGTTTTTTGAAAAACGGTTAACATTAAAACTAACTAAGGAGTAATACCATGGCTTCCTGTACCTACTCTGTACCAAAT ATGAATACTTCTGGTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKKRDQRGDTPSLDINDQLKVKEIAHPFRFEKYSKENELTELIVEAVNRMGGSGELAEEKYRLCVDKLCRKSKLTSQIIQ EEYFDLAEDAYLDRWGLTMLAVELQDQNGLAFFDKILAEEIPEEKSKDPHSFTSVGEEVMIRTTAIEGLERLAANGNDDA IKVLFGNISHEVFSVRRAATQALLAVGGENMLEKLKSELPKRHHDLLKIKRTDVRNAEQAEGGLFIRNQDDSDIPAPKSD SSAKHCRD
Sequences:
>Translated_248_residues MKKRDQRGDTPSLDINDQLKVKEIAHPFRFEKYSKENELTELIVEAVNRMGGSGELAEEKYRLCVDKLCRKSKLTSQIIQ EEYFDLAEDAYLDRWGLTMLAVELQDQNGLAFFDKILAEEIPEEKSKDPHSFTSVGEEVMIRTTAIEGLERLAANGNDDA IKVLFGNISHEVFSVRRAATQALLAVGGENMLEKLKSELPKRHHDLLKIKRTDVRNAEQAEGGLFIRNQDDSDIPAPKSD SSAKHCRD >Mature_248_residues MKKRDQRGDTPSLDINDQLKVKEIAHPFRFEKYSKENELTELIVEAVNRMGGSGELAEEKYRLCVDKLCRKSKLTSQIIQ EEYFDLAEDAYLDRWGLTMLAVELQDQNGLAFFDKILAEEIPEEKSKDPHSFTSVGEEVMIRTTAIEGLERLAANGNDDA IKVLFGNISHEVFSVRRAATQALLAVGGENMLEKLKSELPKRHHDLLKIKRTDVRNAEQAEGGLFIRNQDDSDIPAPKSD SSAKHCRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28075; Mature: 28075
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRDQRGDTPSLDINDQLKVKEIAHPFRFEKYSKENELTELIVEAVNRMGGSGELAEEK CCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH YRLCVDKLCRKSKLTSQIIQEEYFDLAEDAYLDRWGLTMLAVELQDQNGLAFFDKILAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHH IPEEKSKDPHSFTSVGEEVMIRTTAIEGLERLAANGNDDAIKVLFGNISHEVFSVRRAAT CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH QALLAVGGENMLEKLKSELPKRHHDLLKIKRTDVRNAEQAEGGLFIRNQDDSDIPAPKSD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCC SSAKHCRD CCCCCCCC >Mature Secondary Structure MKKRDQRGDTPSLDINDQLKVKEIAHPFRFEKYSKENELTELIVEAVNRMGGSGELAEEK CCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH YRLCVDKLCRKSKLTSQIIQEEYFDLAEDAYLDRWGLTMLAVELQDQNGLAFFDKILAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHH IPEEKSKDPHSFTSVGEEVMIRTTAIEGLERLAANGNDDAIKVLFGNISHEVFSVRRAAT CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH QALLAVGGENMLEKLKSELPKRHHDLLKIKRTDVRNAEQAEGGLFIRNQDDSDIPAPKSD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCC SSAKHCRD CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA