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The map label for this gene is tadA [H]

Identifier: 119946930

GI number: 119946930

Start: 4106170

End: 4106700

Strand: Reverse

Name: tadA [H]

Synonym: Ping_3324

Alternate gene names: 119946930

Gene position: 4106700-4106170 (Counterclockwise)

Preceding gene: 119946931

Following gene: 119946927

Centisome position: 90.07

GC content: 43.31

Gene sequence:

>531_bases
ATGTCAAATGACAAGACATTGACGGCGCAGCAACACAATGATCAAAAATGGATGGCCTACGCGCTCTCTTTAGCAGATAA
AGCCGAATCGTTCGGTGAGATCCCGGTTGGCGCGGTGATTGTTAAAGACAATAAAATAGTGGCGGAAGGTTGGAATTTAT
CCATTATTAATCATAATGCCTGTGCTCATGCGGAGATTATGGCAATACAAAGTGCGGGTCAAAAAATTCAAAATTACCGT
TTAATTGACTGTACGTTATATGTCACCCTAGAGCCCTGCGCGATGTGTGCGGGTGCATTAGTGCATGCGCGCATTAAGCG
TCTTGTTTATGGTGCCGGTGATTATAAAACCGGTGCTGCGGGTTCGGTATTTAACCTTGTGCAGAGTGAACAGTTAAATC
ATCAGCTGGAGGTAACTGCCGGTGTTTTTGCAGAAGAAAGTGCCACAAAAATAAGTGCTTTTTTTAAGCGCCGCCGTTTA
GAAAAAAAACAGTTGAAGAAGCAATTAATTGATTCTACTCTGCCCGCTTAA

Upstream 100 bases:

>100_bases
GTCGGCCAATGCCCTTTGGTCCCTATCTTGCCGTTGCGGGGTGGTTATTTCTGGTTTACGGGGATAGGTTAACTGAAATC
TATTATTCACTGGTTTTATA

Downstream 100 bases:

>100_bases
AAATGAATTATCGAGTGAGTGGAGCCTGAAAACAGTTAACTTTGTATAGAAGCGAACTGTTGATACCATTCAACTTCACT
GATTAAATCTTGCGTCGATT

Product: CMP/dCMP deaminase, zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSNDKTLTAQQHNDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSAGQKIQNYR
LIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQLNHQLEVTAGVFAEESATKISAFFKRRRL
EKKQLKKQLIDSTLPA

Sequences:

>Translated_176_residues
MSNDKTLTAQQHNDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSAGQKIQNYR
LIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQLNHQLEVTAGVFAEESATKISAFFKRRRL
EKKQLKKQLIDSTLPA
>Mature_175_residues
SNDKTLTAQQHNDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSAGQKIQNYRL
IDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQLNHQLEVTAGVFAEESATKISAFFKRRRLE
KKQLKKQLIDSTLPA

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=170, Percent_Identity=32.3529411764706, Blast_Score=87, Evalue=8e-18,
Organism=Escherichia coli, GI145693172, Length=153, Percent_Identity=53.5947712418301, Blast_Score=183, Evalue=7e-48,
Organism=Escherichia coli, GI1786616, Length=157, Percent_Identity=33.7579617834395, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17554608, Length=98, Percent_Identity=37.7551020408163, Blast_Score=79, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17541138, Length=166, Percent_Identity=28.9156626506024, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322425, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=33.5616438356164, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 19336; Mature: 19205

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDKTLTAQQHNDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNA
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCEEEEEECCC
CAHAEIMAIQSAGQKIQNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAA
CCHHHHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVFNLVQSEQLNHQLEVTAGVFAEESATKISAFFKRRRLEKKQLKKQLIDSTLPA
CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNDKTLTAQQHNDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNA
CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCEEEEEECCC
CAHAEIMAIQSAGQKIQNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAA
CCHHHHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVFNLVQSEQLNHQLEVTAGVFAEESATKISAFFKRRRLEKKQLKKQLIDSTLPA
CHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]