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The map label for this gene is recJ [H]

Identifier: 119946908

GI number: 119946908

Start: 4072383

End: 4074101

Strand: Reverse

Name: recJ [H]

Synonym: Ping_3302

Alternate gene names: 119946908

Gene position: 4074101-4072383 (Counterclockwise)

Preceding gene: 119946909

Following gene: 119946906

Centisome position: 89.35

GC content: 42.35

Gene sequence:

>1719_bases
ATGCCTACAGTTCAAGTCAAAAATAGAACCGTTTTAGATCCTGTTCCGATCAACTTAACCTGCTCCCCTTTATTAACACA
GCTTTATATCAATCGCGGTATTAGCAGTGCAAGTGAATTAGATAACAGCACACAAAGTTTACTTCATGCGCAACAATTAA
AAGGCATCACAACGGCCTGTGAACTTTTATATCAGGCCTTATTATCTTCACAAAAAATAATAGTAGTGGGCGATTTTGAC
GCAGATGGCGCGACCAGTACTGCATTGAGTATTTTGGCGTTACGCGGTTTAGGTTTTACCAATATTGATTATCTTATCCC
CAATCGTTTTGATTATGGTTATGGGTTAAGTCCGGAGATCGTCGATTTAGCCATTAGCAAGGGTGCACAATTATTGATGA
CGGTCGATAATGGCATTTCCAGTATCTCTGGTGCTAAACATGCGAAAGATAACGGTCTGAAGTTATTAATTACAGATCAC
CATCTGCCTGGAGCCGAAACGCCGCAAGCGGACGCAATAGTTAATCCGAATCAGGTTGGCTGTAGTTTTCCGAGTAAAAA
CCTGGCGGGTGTCGGTGTCGCTTTTTATGTGATGTTAGCGTTACGTGCTTTCATGCAGAACAAAGGCTATTTTACCCATT
TTAAAGCGCCTAATTTAGCAACATTGTTAGATATAGTAGCTTTAGGGACGGTTGCTGATGTGGTGGTGCTTGATGCTAAT
AACCGCACATTAGTCCATCAGGGATTGGCACGTATTCGCGCAGGCGTTTGCCGGGTCGGGATCAGCGCCTTAATCAGTGT
TGCTAAAAGAAACCAAGGCCAGCTAGTCGCAAGTGATTTAGGCTTTTCATTAGGACCCAGGTTAAATGCCGCCGGGCGCC
TCGATGAAATGAGCTTTGGTGTTGAGTTGTTATTATGCGAAAATGTTGAGCAGGCAAATATAATAGCCAATGAATTAGAT
GCTTTAAATCAGTCGCGTCGCGAGATAGAACAAGGGATGCAGGAAGAGGCGCTAAAAACCTTAGCCAATTTGTCACTTGA
TGAAAATAACATCCCCCATGCTATTTGCTTATTTGAACAGGAATGGCATCAAGGTGTGATAGGGTTAGTGGCATCGCGTA
TTAAAGAAAAATATTACCGTCCTACCTTTGCATTTGCTAAGGCTAACAATGGCGAAATTAAAGCATCCGCACGTTCCATT
CCAGGCGTACATATTCGTGATATGCTCGATTTAGTGGATAAAAAAATACCTGGTGTTATCTTAAAATTCGGCGGGCATGC
AATGGCTGCCGGACTCTCTGTAAAAGAGACTGACTTTGAATTATTTAGTAAAACCATTAATAGGGTACTTCAAGAACAGG
TCGATAATGATCTGCTAAACAATATAATCCTTTGTGATGGACAATTAAATAGCCAGCAGTTTAGCCTTGAACAAGCTCAA
GAGTTAAGAGATGCGGGACCATGGGGTCAGGGCTTTCCTGCCCCTCTCTTTGATGGCGAATTTAAACTGCTGCAGCAGCG
CTTGGTGGGCAGCCACCATTTAAAAATGACCTTAGAGTTTGAGGGTAAAACGATTGAGGCGATCGCCTTTAATATTGATG
TCGAGTTTTGGCCAAATCCGATGGTAAAAACGGTATATTGTGTTTACCGTTTAGATATCAATGAATTTAGAGGTAATAGG
ACAGTGCAGATGCTGGTGGAAGTGTTACGAGCGGAATAA

Upstream 100 bases:

>100_bases
GATTTTTTAATATAGTGCCCTTATAGCCAGATCATTTGCTGATGCCTGCATTCGCAAATGATCTGGCTATATTCTTATTA
CAAAGCATTTGGTAGCCATT

Downstream 100 bases:

>100_bases
GAACGAAATAAGAAGCTGTCAGCTGACAGCCGTTAGCCGTTTGTTTAAACTGCGCCTTCAAAATCGAGTTGGCGCCAAGC
TTCGTAGACGAATACTGAGA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MPTVQVKNRTVLDPVPINLTCSPLLTQLYINRGISSASELDNSTQSLLHAQQLKGITTACELLYQALLSSQKIIVVGDFD
ADGATSTALSILALRGLGFTNIDYLIPNRFDYGYGLSPEIVDLAISKGAQLLMTVDNGISSISGAKHAKDNGLKLLITDH
HLPGAETPQADAIVNPNQVGCSFPSKNLAGVGVAFYVMLALRAFMQNKGYFTHFKAPNLATLLDIVALGTVADVVVLDAN
NRTLVHQGLARIRAGVCRVGISALISVAKRNQGQLVASDLGFSLGPRLNAAGRLDEMSFGVELLLCENVEQANIIANELD
ALNQSRREIEQGMQEEALKTLANLSLDENNIPHAICLFEQEWHQGVIGLVASRIKEKYYRPTFAFAKANNGEIKASARSI
PGVHIRDMLDLVDKKIPGVILKFGGHAMAAGLSVKETDFELFSKTINRVLQEQVDNDLLNNIILCDGQLNSQQFSLEQAQ
ELRDAGPWGQGFPAPLFDGEFKLLQQRLVGSHHLKMTLEFEGKTIEAIAFNIDVEFWPNPMVKTVYCVYRLDINEFRGNR
TVQMLVEVLRAE

Sequences:

>Translated_572_residues
MPTVQVKNRTVLDPVPINLTCSPLLTQLYINRGISSASELDNSTQSLLHAQQLKGITTACELLYQALLSSQKIIVVGDFD
ADGATSTALSILALRGLGFTNIDYLIPNRFDYGYGLSPEIVDLAISKGAQLLMTVDNGISSISGAKHAKDNGLKLLITDH
HLPGAETPQADAIVNPNQVGCSFPSKNLAGVGVAFYVMLALRAFMQNKGYFTHFKAPNLATLLDIVALGTVADVVVLDAN
NRTLVHQGLARIRAGVCRVGISALISVAKRNQGQLVASDLGFSLGPRLNAAGRLDEMSFGVELLLCENVEQANIIANELD
ALNQSRREIEQGMQEEALKTLANLSLDENNIPHAICLFEQEWHQGVIGLVASRIKEKYYRPTFAFAKANNGEIKASARSI
PGVHIRDMLDLVDKKIPGVILKFGGHAMAAGLSVKETDFELFSKTINRVLQEQVDNDLLNNIILCDGQLNSQQFSLEQAQ
ELRDAGPWGQGFPAPLFDGEFKLLQQRLVGSHHLKMTLEFEGKTIEAIAFNIDVEFWPNPMVKTVYCVYRLDINEFRGNR
TVQMLVEVLRAE
>Mature_571_residues
PTVQVKNRTVLDPVPINLTCSPLLTQLYINRGISSASELDNSTQSLLHAQQLKGITTACELLYQALLSSQKIIVVGDFDA
DGATSTALSILALRGLGFTNIDYLIPNRFDYGYGLSPEIVDLAISKGAQLLMTVDNGISSISGAKHAKDNGLKLLITDHH
LPGAETPQADAIVNPNQVGCSFPSKNLAGVGVAFYVMLALRAFMQNKGYFTHFKAPNLATLLDIVALGTVADVVVLDANN
RTLVHQGLARIRAGVCRVGISALISVAKRNQGQLVASDLGFSLGPRLNAAGRLDEMSFGVELLLCENVEQANIIANELDA
LNQSRREIEQGMQEEALKTLANLSLDENNIPHAICLFEQEWHQGVIGLVASRIKEKYYRPTFAFAKANNGEIKASARSIP
GVHIRDMLDLVDKKIPGVILKFGGHAMAAGLSVKETDFELFSKTINRVLQEQVDNDLLNNIILCDGQLNSQQFSLEQAQE
LRDAGPWGQGFPAPLFDGEFKLLQQRLVGSHHLKMTLEFEGKTIEAIAFNIDVEFWPNPMVKTVYCVYRLDINEFRGNRT
VQMLVEVLRAE

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=568, Percent_Identity=56.5140845070422, Blast_Score=672, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62590; Mature: 62459

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVQVKNRTVLDPVPINLTCSPLLTQLYINRGISSASELDNSTQSLLHAQQLKGITTAC
CCCEEECCCEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCHHHHH
ELLYQALLSSQKIIVVGDFDADGATSTALSILALRGLGFTNIDYLIPNRFDYGYGLSPEI
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHH
VDLAISKGAQLLMTVDNGISSISGAKHAKDNGLKLLITDHHLPGAETPQADAIVNPNQVG
HHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCC
CSFPSKNLAGVGVAFYVMLALRAFMQNKGYFTHFKAPNLATLLDIVALGTVADVVVLDAN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEECCC
NRTLVHQGLARIRAGVCRVGISALISVAKRNQGQLVASDLGFSLGPRLNAAGRLDEMSFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCCCHHHHCC
VELLLCENVEQANIIANELDALNQSRREIEQGMQEEALKTLANLSLDENNIPHAICLFEQ
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHH
EWHQGVIGLVASRIKEKYYRPTFAFAKANNGEIKASARSIPGVHIRDMLDLVDKKIPGVI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEE
LKFGGHAMAAGLSVKETDFELFSKTINRVLQEQVDNDLLNNIILCDGQLNSQQFSLEQAQ
EEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
ELRDAGPWGQGFPAPLFDGEFKLLQQRLVGSHHLKMTLEFEGKTIEAIAFNIDVEFWPNP
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEEECCCC
MVKTVYCVYRLDINEFRGNRTVQMLVEVLRAE
HHHHEEEEEEEEHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PTVQVKNRTVLDPVPINLTCSPLLTQLYINRGISSASELDNSTQSLLHAQQLKGITTAC
CCEEECCCEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCHHHHH
ELLYQALLSSQKIIVVGDFDADGATSTALSILALRGLGFTNIDYLIPNRFDYGYGLSPEI
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHH
VDLAISKGAQLLMTVDNGISSISGAKHAKDNGLKLLITDHHLPGAETPQADAIVNPNQVG
HHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCC
CSFPSKNLAGVGVAFYVMLALRAFMQNKGYFTHFKAPNLATLLDIVALGTVADVVVLDAN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEECCC
NRTLVHQGLARIRAGVCRVGISALISVAKRNQGQLVASDLGFSLGPRLNAAGRLDEMSFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCCCHHHHCC
VELLLCENVEQANIIANELDALNQSRREIEQGMQEEALKTLANLSLDENNIPHAICLFEQ
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHH
EWHQGVIGLVASRIKEKYYRPTFAFAKANNGEIKASARSIPGVHIRDMLDLVDKKIPGVI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEE
LKFGGHAMAAGLSVKETDFELFSKTINRVLQEQVDNDLLNNIILCDGQLNSQQFSLEQAQ
EEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
ELRDAGPWGQGFPAPLFDGEFKLLQQRLVGSHHLKMTLEFEGKTIEAIAFNIDVEFWPNP
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEEECCCC
MVKTVYCVYRLDINEFRGNRTVQMLVEVLRAE
HHHHEEEEEEEEHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]