Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is fieF [H]
Identifier: 119946906
GI number: 119946906
Start: 4070422
End: 4071378
Strand: Reverse
Name: fieF [H]
Synonym: Ping_3300
Alternate gene names: 119946906
Gene position: 4071378-4070422 (Counterclockwise)
Preceding gene: 119946908
Following gene: 119946905
Centisome position: 89.29
GC content: 41.27
Gene sequence:
>957_bases TTGTCCAAAAATCTCAAAAAAGAAGAGTATAACCGATTGGTTAACCTTGCCGGACGGGCTGCTATTTTCGCCGCCTCTTT GCTGATTCTCGTTAAATTAATTGCCTGGGTGATGACCGGCTCTGCCAGTATTTTAGCCACCCTGACCGATTCGTTAATGG ATGTCACTACTTCTATTATCAATCTGTTAGCGATTAAGATAGCCCTTCAACCTGCCGATGATGAACACCGTTTTGGTCAT GGTAAAGCAGAGAGTCTTGCCGGGCTAGCACAAGCCGCCTTCATTTCTGGTACGTCTATGTACTTGATGTTTAATGGTAT TTCTGCTTTGGTTAACGGACATCAAATAAGTGCAACAAATGTTGGCATTGGGGTAATGATTTTCTCTGTTATCGTCACTA TTTTATTGGTTGCATTTCAAAGCTATATTGTGAAAAAAACAGATAGCATGGCAATTAGAGCCGATTCACTGCATTACCGG ACCGATATTGCCATGAATGGCGCGGTATTATTGGCGCTTATATTGGCCGGGTACGGCTGGTATTGGGCTGATGGTGTATT TGCGATTGCGGTTAGTTTTTATATTTTACATGGCGCATGGCAGATTGGCCGTTTGTCAATTGATGCTCTGATGGATAAAC AACTGCCTAAATCTGATGAAGAGAAAATTGTAAAAACTGCCTATCATATCAAGGGGGTGCGTGGTGTTCATGATTTACGA ACCAGATTATCGGGTAATACAAAATTCATTCAGCTACACTTGGAACTTGATGATAATCAAAGCTTATTAGAAGCGCATAA CAAAGCGGATCAGTTAGAAGAGGCGTTAGAGTCTGATTTCCCTCGCGCAGATATACTCATCCATCTGGATCCTTTGTCGA TAGTTGAGGAAGAAAAATTGAACGACAAATTACAATTTGAAACATCGCCAGTTACCTCGGATAAGGACAATATTTAA
Upstream 100 bases:
>100_bases AGGATATTTTAACGCTTTGACGAGGAACTGAAACTCGCATTTATAAATGGGTAGGGTATAATCACTGCCTGATTTTTTTG TTATATGATAGGTGTTCTTT
Downstream 100 bases:
>100_bases TGGACGCGACTCAGAAAAAATTATGGAAAAAAATTAGGGAAGAAGCGCTGCATTATTCTGCTAGTGAACCCATTTTGGCG AGCTTTTTTTATTCAACAAT
Product: iron and zinc efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSKNLKKEEYNRLVNLAGRAAIFAASLLILVKLIAWVMTGSASILATLTDSLMDVTTSIINLLAIKIALQPADDEHRFGH GKAESLAGLAQAAFISGTSMYLMFNGISALVNGHQISATNVGIGVMIFSVIVTILLVAFQSYIVKKTDSMAIRADSLHYR TDIAMNGAVLLALILAGYGWYWADGVFAIAVSFYILHGAWQIGRLSIDALMDKQLPKSDEEKIVKTAYHIKGVRGVHDLR TRLSGNTKFIQLHLELDDNQSLLEAHNKADQLEEALESDFPRADILIHLDPLSIVEEEKLNDKLQFETSPVTSDKDNI
Sequences:
>Translated_318_residues MSKNLKKEEYNRLVNLAGRAAIFAASLLILVKLIAWVMTGSASILATLTDSLMDVTTSIINLLAIKIALQPADDEHRFGH GKAESLAGLAQAAFISGTSMYLMFNGISALVNGHQISATNVGIGVMIFSVIVTILLVAFQSYIVKKTDSMAIRADSLHYR TDIAMNGAVLLALILAGYGWYWADGVFAIAVSFYILHGAWQIGRLSIDALMDKQLPKSDEEKIVKTAYHIKGVRGVHDLR TRLSGNTKFIQLHLELDDNQSLLEAHNKADQLEEALESDFPRADILIHLDPLSIVEEEKLNDKLQFETSPVTSDKDNI >Mature_317_residues SKNLKKEEYNRLVNLAGRAAIFAASLLILVKLIAWVMTGSASILATLTDSLMDVTTSIINLLAIKIALQPADDEHRFGHG KAESLAGLAQAAFISGTSMYLMFNGISALVNGHQISATNVGIGVMIFSVIVTILLVAFQSYIVKKTDSMAIRADSLHYRT DIAMNGAVLLALILAGYGWYWADGVFAIAVSFYILHGAWQIGRLSIDALMDKQLPKSDEEKIVKTAYHIKGVRGVHDLRT RLSGNTKFIQLHLELDDNQSLLEAHNKADQLEEALESDFPRADILIHLDPLSIVEEEKLNDKLQFETSPVTSDKDNI
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=292, Percent_Identity=49.3150684931507, Blast_Score=300, Evalue=1e-82, Organism=Caenorhabditis elegans, GI72000060, Length=288, Percent_Identity=24.6527777777778, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI72000062, Length=288, Percent_Identity=24.6527777777778, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34922; Mature: 34791
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNLKKEEYNRLVNLAGRAAIFAASLLILVKLIAWVMTGSASILATLTDSLMDVTTSII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NLLAIKIALQPADDEHRFGHGKAESLAGLAQAAFISGTSMYLMFNGISALVNGHQISATN HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHCCCEEEECC VGIGVMIFSVIVTILLVAFQSYIVKKTDSMAIRADSLHYRTDIAMNGAVLLALILAGYGW CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHCCHHHHHHHHHHCCCH YWADGVFAIAVSFYILHGAWQIGRLSIDALMDKQLPKSDEEKIVKTAYHIKGVRGVHDLR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH TRLSGNTKFIQLHLELDDNQSLLEAHNKADQLEEALESDFPRADILIHLDPLSIVEEEKL HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHC NDKLQFETSPVTSDKDNI CCCEEEECCCCCCCCCCC >Mature Secondary Structure SKNLKKEEYNRLVNLAGRAAIFAASLLILVKLIAWVMTGSASILATLTDSLMDVTTSII CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NLLAIKIALQPADDEHRFGHGKAESLAGLAQAAFISGTSMYLMFNGISALVNGHQISATN HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHCCCEEEECC VGIGVMIFSVIVTILLVAFQSYIVKKTDSMAIRADSLHYRTDIAMNGAVLLALILAGYGW CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHCCHHHHHHHHHHCCCH YWADGVFAIAVSFYILHGAWQIGRLSIDALMDKQLPKSDEEKIVKTAYHIKGVRGVHDLR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH TRLSGNTKFIQLHLELDDNQSLLEAHNKADQLEEALESDFPRADILIHLDPLSIVEEEKL HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHC NDKLQFETSPVTSDKDNI CCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA