Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is cysE [H]
Identifier: 119946905
GI number: 119946905
Start: 4069640
End: 4070422
Strand: Reverse
Name: cysE [H]
Synonym: Ping_3299
Alternate gene names: 119946905
Gene position: 4070422-4069640 (Counterclockwise)
Preceding gene: 119946906
Following gene: 119946903
Centisome position: 89.27
GC content: 41.63
Gene sequence:
>783_bases ATGGACGCGACTCAGAAAAAATTATGGAAAAAAATTAGGGAAGAAGCGCTGCATTATTCTGCTAGTGAACCCATTTTGGC GAGCTTTTTTTATTCAACAATATTAAATCATCATAGTTTAAAGTCGGCATTAAGTTATCAGCTGGCTAATCGTTTGGATC ACCCGACTATGCCGGGCATTCTGTTGCGTGAAGTTATTGAAGAAGCATTTACTGAATCACCAGAAATTATGACTGCCGTT ATGGCTGACATTATTGCCGTTCAGGACAGAGATCCTGCGGTTAATGATTATTCAACACCTTTGCTTTACCTTAAAGGTTT TCAAGCAATTCAAGTTCACCGTGTTGCTCATTGGCTGTGGAAAAAAAATCGCATAACATTAGCGTTATATTTACAAAATC GTAGTTCTGAGCTGTTTTCTGTAGATGTTCATCCAGCAGCAACTATCGGTAAAGGTATTATGTTTGACCACGCGACAGGT GTTGTTATTGGTGAAACAGCCGTTATTGAAGATGATGTCTCTTTATTACAAGGTGTGACATTAGGTGGAACGGGTAAAAC TTGTGGTGATCGCCACCCTAAAATTCGTCAGGGGGTGATGATCGGGGCCGGCGCAACAGTGCTTGGTAATATTGAAATTG GCAAGGGTGCGAAAATTGGTGCCGGCAGTGTTGTATTATACGCAGTACCTGCTCATACCACAGTCGCAGGGGTTCCAGCC AAAGTTGTAGGTGTTCCTTCCTGTGAGATGCCGTCTTTATCAATGGATCAATATCTTTCATAA
Upstream 100 bases:
>100_bases TCATCCATCTGGATCCTTTGTCGATAGTTGAGGAAGAAAAATTGAACGACAAATTACAATTTGAAACATCGCCAGTTACC TCGGATAAGGACAATATTTA
Downstream 100 bases:
>100_bases ACGGAGTTCATTGAGGTGTTTGTAAACTGCATTCACCTCTTTCATAGGCCCTTACTCTGGTTTTGCTAATAAACAGGTCT CGCCGATAAAAATAATCGTG
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDATQKKLWKKIREEALHYSASEPILASFFYSTILNHHSLKSALSYQLANRLDHPTMPGILLREVIEEAFTESPEIMTAV MADIIAVQDRDPAVNDYSTPLLYLKGFQAIQVHRVAHWLWKKNRITLALYLQNRSSELFSVDVHPAATIGKGIMFDHATG VVIGETAVIEDDVSLLQGVTLGGTGKTCGDRHPKIRQGVMIGAGATVLGNIEIGKGAKIGAGSVVLYAVPAHTTVAGVPA KVVGVPSCEMPSLSMDQYLS
Sequences:
>Translated_260_residues MDATQKKLWKKIREEALHYSASEPILASFFYSTILNHHSLKSALSYQLANRLDHPTMPGILLREVIEEAFTESPEIMTAV MADIIAVQDRDPAVNDYSTPLLYLKGFQAIQVHRVAHWLWKKNRITLALYLQNRSSELFSVDVHPAATIGKGIMFDHATG VVIGETAVIEDDVSLLQGVTLGGTGKTCGDRHPKIRQGVMIGAGATVLGNIEIGKGAKIGAGSVVLYAVPAHTTVAGVPA KVVGVPSCEMPSLSMDQYLS >Mature_260_residues MDATQKKLWKKIREEALHYSASEPILASFFYSTILNHHSLKSALSYQLANRLDHPTMPGILLREVIEEAFTESPEIMTAV MADIIAVQDRDPAVNDYSTPLLYLKGFQAIQVHRVAHWLWKKNRITLALYLQNRSSELFSVDVHPAATIGKGIMFDHATG VVIGETAVIEDDVSLLQGVTLGGTGKTCGDRHPKIRQGVMIGAGATVLGNIEIGKGAKIGAGSVVLYAVPAHTTVAGVPA KVVGVPSCEMPSLSMDQYLS
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=253, Percent_Identity=62.4505928853755, Blast_Score=345, Evalue=1e-96, Organism=Escherichia coli, GI1788371, Length=143, Percent_Identity=35.6643356643357, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR010493 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF06426 SATase_N [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 28146; Mature: 28146
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATQKKLWKKIREEALHYSASEPILASFFYSTILNHHSLKSALSYQLANRLDHPTMPGI CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LLREVIEEAFTESPEIMTAVMADIIAVQDRDPAVNDYSTPLLYLKGFQAIQVHRVAHWLW HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH KKNRITLALYLQNRSSELFSVDVHPAATIGKGIMFDHATGVVIGETAVIEDDVSLLQGVT CCCCEEEEEEEECCCCCEEEEECCCHHHHCCCEEEECCCCEEECCCEEEHHHHHHHCCCE LGGTGKTCGDRHPKIRQGVMIGAGATVLGNIEIGKGAKIGAGSVVLYAVPAHTTVAGVPA ECCCCCCCCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCCEECCCCE KVVGVPSCEMPSLSMDQYLS EEEECCCCCCCCCCHHHHCC >Mature Secondary Structure MDATQKKLWKKIREEALHYSASEPILASFFYSTILNHHSLKSALSYQLANRLDHPTMPGI CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LLREVIEEAFTESPEIMTAVMADIIAVQDRDPAVNDYSTPLLYLKGFQAIQVHRVAHWLW HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH KKNRITLALYLQNRSSELFSVDVHPAATIGKGIMFDHATGVVIGETAVIEDDVSLLQGVT CCCCEEEEEEEECCCCCEEEEECCCHHHHCCCEEEECCCCEEECCCEEEHHHHHHHCCCE LGGTGKTCGDRHPKIRQGVMIGAGATVLGNIEIGKGAKIGAGSVVLYAVPAHTTVAGVPA ECCCCCCCCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCCEECCCCE KVVGVPSCEMPSLSMDQYLS EEEECCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]