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The map label for this gene is ybiT [H]

Identifier: 119946866

GI number: 119946866

Start: 4023238

End: 4024809

Strand: Direct

Name: ybiT [H]

Synonym: Ping_3260

Alternate gene names: 119946866

Gene position: 4023238-4024809 (Clockwise)

Preceding gene: 119946862

Following gene: 119946868

Centisome position: 88.24

GC content: 41.35

Gene sequence:

>1572_bases
ATGCAGTTTGGTGCAAAACCTTTATTCGAAAATATCTCAGTTAAATTTGGTAATGGTAACCGTTATGGCCTGATTGGTGC
CAACGGTTGTGGTAAATCAACGTTCATGAAAATTTTAACTGGCGACTTAGAGCCAAGTGCCGGTAATGTTGCCAAAGATC
CTAACGAACGTATTGCAAAACTGCATCAAGACCAGTTCGCTTTCGAAGAATTCTCGGTACTTGATACCGTATTAATGGGT
CACAAAGAGATGTGGGCTGTGATGGCTGAACGTAATCGCATCTACAGTCTGCCTGAAATGAGCGAAGAAGACGGCATGAA
AGTTGCCAATCTTGAAACTGAATTCGCCGAGATGGACGGTTATACTGCCGACGCCCGCGCCGGAGAATTATTACTGAGCG
TTGGTATCCCGCTGGACTTGCACTACGGCTTAATGTCAGAAGTAGCACCGGGTTGGAAACTGCGTGTACTGCTTGCACAA
GTCTTATTCTCAAATCCAGAAATTATGTTACTTGATGAGCCAACCAATAACCTGGACATTGATACTATCCGCTGGTTGGA
AGACGAGTTAAAAGCACGTCAATGTACTATGGTTATCATCTCACATGACCGTCATTTCTTAAACTCAGTGTGTTCTCATA
TGGCCGATATTGATTATGGCGAACTGCGTTTATATCCCGGCAACTATGATGAATACATGACGGCAGCAACACAGGTTCGT
GATCGTCTATTGTCCGATAATGCCAAGAAAAAAGCGCAGCTTTCTGAACTACAGGATTTTGTTAGCCGTTTTTCTGCCAA
TGCATCAAAAGCCAAACAAGCGACCTCTCGTGCAAAACAGATGGATAAAATCGTACTCGATGAAGTTAAACCATCAAGCC
GTGTTAATCCTTATATTGTTTTCAAACAAGAGAAAAAACTGTTTCGTACTGCACTGGAAGTCACTAAGGCCTGTAAATCT
TTTGATAAAGTCCTGTTTAAGGACTTTAACCTGATGGTTGAAGTGGGTGAACGTATTGCTATTATTGGCCAAAATGGTGT
AGGTAAAACAACATTATTACGCACTTTAATGGACCACACTCAATTAGATTCAGGTCAGTTTAAGTGGTCTGAAAATGCGC
ACTTAGGTTATTACGCGCAGGATCATGCTTACGCTTTTGAAAAAGACCAAACTTTAATGGAATGGATGAGTCAATGGATG
AAACCCGGCGATGACGAACAATCTATCCGCGGTACATTAGGGCGTTTACTGTTTGGCTCAAACGACATCGGTAAATCCGT
GAAAATCATTTCCGGTGGTGAGCAAGGCAGAATGTTATTTGGTAAATTAATGATGGACTTGCCCAATATACTATTAATGG
ATGAACCCACCAATCACTTGGATATGGAATCTATTGAGTCGTTAAACTTAGCGCTTGATAATTATAAAGGAACACTCTTA
TTTGTCAGTCATGACCGTGAGTTTGTCTCTTCATTAGCAACGCGTATTATCGAAATCAAAGCAGATAAAATTATTGATTT
CCACGGCACCTACAGTGAATACCTTAATAGCCAAGGTGTTGTATCCGCTTAA

Upstream 100 bases:

>100_bases
TTAACAGCCCTAACACAAACCATATAAACATAGCGGGGTTTACAAATAAACCTCGCCTTGAATTAGGAAAATCGCCTTGT
TAAGTACGAACAACATCACC

Downstream 100 bases:

>100_bases
TAGGGTTAATATAATCTCCCATGCAAAACATGGGCATTAAAAAAAGGGCCTAGTGCCCTTTTTTTGTTGTTATGGAATGA
CATGATCAGCTTACTTTTTT

Product: ABC transporter ATP-binding protein, two fused

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MQFGAKPLFENISVKFGNGNRYGLIGANGCGKSTFMKILTGDLEPSAGNVAKDPNERIAKLHQDQFAFEEFSVLDTVLMG
HKEMWAVMAERNRIYSLPEMSEEDGMKVANLETEFAEMDGYTADARAGELLLSVGIPLDLHYGLMSEVAPGWKLRVLLAQ
VLFSNPEIMLLDEPTNNLDIDTIRWLEDELKARQCTMVIISHDRHFLNSVCSHMADIDYGELRLYPGNYDEYMTAATQVR
DRLLSDNAKKKAQLSELQDFVSRFSANASKAKQATSRAKQMDKIVLDEVKPSSRVNPYIVFKQEKKLFRTALEVTKACKS
FDKVLFKDFNLMVEVGERIAIIGQNGVGKTTLLRTLMDHTQLDSGQFKWSENAHLGYYAQDHAYAFEKDQTLMEWMSQWM
KPGDDEQSIRGTLGRLLFGSNDIGKSVKIISGGEQGRMLFGKLMMDLPNILLMDEPTNHLDMESIESLNLALDNYKGTLL
FVSHDREFVSSLATRIIEIKADKIIDFHGTYSEYLNSQGVVSA

Sequences:

>Translated_523_residues
MQFGAKPLFENISVKFGNGNRYGLIGANGCGKSTFMKILTGDLEPSAGNVAKDPNERIAKLHQDQFAFEEFSVLDTVLMG
HKEMWAVMAERNRIYSLPEMSEEDGMKVANLETEFAEMDGYTADARAGELLLSVGIPLDLHYGLMSEVAPGWKLRVLLAQ
VLFSNPEIMLLDEPTNNLDIDTIRWLEDELKARQCTMVIISHDRHFLNSVCSHMADIDYGELRLYPGNYDEYMTAATQVR
DRLLSDNAKKKAQLSELQDFVSRFSANASKAKQATSRAKQMDKIVLDEVKPSSRVNPYIVFKQEKKLFRTALEVTKACKS
FDKVLFKDFNLMVEVGERIAIIGQNGVGKTTLLRTLMDHTQLDSGQFKWSENAHLGYYAQDHAYAFEKDQTLMEWMSQWM
KPGDDEQSIRGTLGRLLFGSNDIGKSVKIISGGEQGRMLFGKLMMDLPNILLMDEPTNHLDMESIESLNLALDNYKGTLL
FVSHDREFVSSLATRIIEIKADKIIDFHGTYSEYLNSQGVVSA
>Mature_523_residues
MQFGAKPLFENISVKFGNGNRYGLIGANGCGKSTFMKILTGDLEPSAGNVAKDPNERIAKLHQDQFAFEEFSVLDTVLMG
HKEMWAVMAERNRIYSLPEMSEEDGMKVANLETEFAEMDGYTADARAGELLLSVGIPLDLHYGLMSEVAPGWKLRVLLAQ
VLFSNPEIMLLDEPTNNLDIDTIRWLEDELKARQCTMVIISHDRHFLNSVCSHMADIDYGELRLYPGNYDEYMTAATQVR
DRLLSDNAKKKAQLSELQDFVSRFSANASKAKQATSRAKQMDKIVLDEVKPSSRVNPYIVFKQEKKLFRTALEVTKACKS
FDKVLFKDFNLMVEVGERIAIIGQNGVGKTTLLRTLMDHTQLDSGQFKWSENAHLGYYAQDHAYAFEKDQTLMEWMSQWM
KPGDDEQSIRGTLGRLLFGSNDIGKSVKIISGGEQGRMLFGKLMMDLPNILLMDEPTNHLDMESIESLNLALDNYKGTLL
FVSHDREFVSSLATRIIEIKADKIIDFHGTYSEYLNSQGVVSA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=29.1428571428571, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=26.3450834879406, Blast_Score=215, Evalue=9e-56,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=26.3450834879406, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI10947135, Length=533, Percent_Identity=27.5797373358349, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI69354671, Length=533, Percent_Identity=27.5797373358349, Blast_Score=194, Evalue=2e-49,
Organism=Escherichia coli, GI1787041, Length=521, Percent_Identity=73.7044145873321, Blast_Score=822, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=517, Percent_Identity=30.7543520309478, Blast_Score=268, Evalue=7e-73,
Organism=Escherichia coli, GI1787182, Length=510, Percent_Identity=32.7450980392157, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI2367384, Length=518, Percent_Identity=29.7297297297297, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1788165, Length=171, Percent_Identity=28.6549707602339, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787758, Length=244, Percent_Identity=26.6393442622951, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790739, Length=251, Percent_Identity=25.8964143426295, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=206, Percent_Identity=26.2135922330097, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081709, Length=252, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=24.1071428571429, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=529, Percent_Identity=30.0567107750473, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=28.4916201117318, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17559834, Length=532, Percent_Identity=28.1954887218045, Blast_Score=216, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320874, Length=532, Percent_Identity=30.8270676691729, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=29.9625468164794, Blast_Score=237, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6323278, Length=412, Percent_Identity=25.2427184466019, Blast_Score=120, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=25.6658595641646, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=415, Percent_Identity=24.0963855421687, Blast_Score=106, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=29.6577946768061, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24642252, Length=532, Percent_Identity=28.5714285714286, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI18859989, Length=532, Percent_Identity=28.5714285714286, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24641342, Length=526, Percent_Identity=27.5665399239544, Blast_Score=215, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58992; Mature: 58992

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGAKPLFENISVKFGNGNRYGLIGANGCGKSTFMKILTGDLEPSAGNVAKDPNERIAK
CCCCCCCHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LHQDQFAFEEFSVLDTVLMGHKEMWAVMAERNRIYSLPEMSEEDGMKVANLETEFAEMDG
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCCCCEEEECHHHHHHCCC
YTADARAGELLLSVGIPLDLHYGLMSEVAPGWKLRVLLAQVLFSNPEIMLLDEPTNNLDI
CCCCCCCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
DTIRWLEDELKARQCTMVIISHDRHFLNSVCSHMADIDYGELRLYPGNYDEYMTAATQVR
HHHHHHHHHHHHCEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
DRLLSDNAKKKAQLSELQDFVSRFSANASKAKQATSRAKQMDKIVLDEVKPSSRVNPYIV
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
FKQEKKLFRTALEVTKACKSFDKVLFKDFNLMVEVGERIAIIGQNGVGKTTLLRTLMDHT
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHH
QLDSGQFKWSENAHLGYYAQDHAYAFEKDQTLMEWMSQWMKPGDDEQSIRGTLGRLLFGS
CCCCCCEEECCCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
NDIGKSVKIISGGEQGRMLFGKLMMDLPNILLMDEPTNHLDMESIESLNLALDNYKGTLL
CCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCEEE
FVSHDREFVSSLATRIIEIKADKIIDFHGTYSEYLNSQGVVSA
EEECCHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MQFGAKPLFENISVKFGNGNRYGLIGANGCGKSTFMKILTGDLEPSAGNVAKDPNERIAK
CCCCCCCHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LHQDQFAFEEFSVLDTVLMGHKEMWAVMAERNRIYSLPEMSEEDGMKVANLETEFAEMDG
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCCCCEEEECHHHHHHCCC
YTADARAGELLLSVGIPLDLHYGLMSEVAPGWKLRVLLAQVLFSNPEIMLLDEPTNNLDI
CCCCCCCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
DTIRWLEDELKARQCTMVIISHDRHFLNSVCSHMADIDYGELRLYPGNYDEYMTAATQVR
HHHHHHHHHHHHCEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
DRLLSDNAKKKAQLSELQDFVSRFSANASKAKQATSRAKQMDKIVLDEVKPSSRVNPYIV
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
FKQEKKLFRTALEVTKACKSFDKVLFKDFNLMVEVGERIAIIGQNGVGKTTLLRTLMDHT
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHH
QLDSGQFKWSENAHLGYYAQDHAYAFEKDQTLMEWMSQWMKPGDDEQSIRGTLGRLLFGS
CCCCCCEEECCCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
NDIGKSVKIISGGEQGRMLFGKLMMDLPNILLMDEPTNHLDMESIESLNLALDNYKGTLL
CCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCEEE
FVSHDREFVSSLATRIIEIKADKIIDFHGTYSEYLNSQGVVSA
EEECCHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]