Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is tas [H]
Identifier: 119946868
GI number: 119946868
Start: 4026137
End: 4027189
Strand: Direct
Name: tas [H]
Synonym: Ping_3262
Alternate gene names: 119946868
Gene position: 4026137-4027189 (Clockwise)
Preceding gene: 119946866
Following gene: 119946872
Centisome position: 88.3
GC content: 43.59
Gene sequence:
>1053_bases ATGGAGTTTACAACGTTGGGAAGCAGTGGACTTCCAATATCAAAAGTCTGTTTAGGATCGATGACTTGGGGATTACAAAA TAATCAACAGGATGCAAATCAGCAAATAGACTATGCCATTAGCCAGGGTATTAATTTTATTGATACAGCTGAAATGTATG CAGTGCCGCCCTCGCCCGATACCTATGGAAAAACAGAAAGCATTCTGGGTAACTGGCTGGCGGAAAATAAAAATAAGCGT AAAGATCTGATCATTGCCACTAAAATAGCCGGTGCCGGTGTGCCCTGGATACGTGATGGTGGACCTATTACGGGTGATGC AGTTGTGGCAGCGGTAGATGCTTCTCTGAAACGTTTACAGACTGATTATATCGATCTTTATCAGCTGCATTGGCCAAATC GAACTTCTCCCCATTTTAACAAACACTGGCCAAATCAATTAACATTCAGTGAGGTCAGCGCAGAGGATCACACTGCACAA ATGTTAGATATTTTACAAGGGCTTAACCGCTGCGTTAAAGCCGGGAAAATACGTCATTGCGGATTATCTGACGACACCCC TTGGGGCATTAATACCTACCTTAAATTAAGCGAAAAACACGATCTGCCAAGAATGGTTTCAATACAAAATGAATTTAGCT TACTGCATGCTAAGGACTGGCCTTATTTAATAGAAAACTGTATCCATGAAGATATTGCTTATTTACCATGGTCCCCGCTT GCGGGTGGGATGCTAAGCGGTAAATATCTCAATGGTGCCCGTCCAGAGGGCAGTCGCTGGACATTGGAGCAGCGTAATGG TTTATTCCGCGATACACCGGCGGCACAAAAAGCAATTTCAGCCTATGCCGAGATAGCGAAACAAAACGGCTTTACGCCCG CTCAATTAGCGCTCGCCTGGTGCAATCAAGTTGATGGTGTCACCTCAACTATTATTGGCGCGACAAATATCAACCAATTA CAGGACGATATTAAGGCATTTTCAATGCCCTTAAACCAACAAGCGCTCATTGATATAGAGTCTGTCTTTAAAACCTACCC TGTGCCTTTTTAA
Upstream 100 bases:
>100_bases TCAGTCATTTAAACAGTATAGTATTTGAATACTGTTATTTACGACAACCAATATAATTTATTTTTAGCTTGTGATATTAA CATCTATTTAAGGAATCAGT
Downstream 100 bases:
>100_bases ACTAAACGCATAAACCAGAAAACCACCGCTAATTAAATTGGCGGTGGTTTTCTATGTACTTCAAGCTGCATCTGCCTGCG CTATTTATTGCACAAATTCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MEFTTLGSSGLPISKVCLGSMTWGLQNNQQDANQQIDYAISQGINFIDTAEMYAVPPSPDTYGKTESILGNWLAENKNKR KDLIIATKIAGAGVPWIRDGGPITGDAVVAAVDASLKRLQTDYIDLYQLHWPNRTSPHFNKHWPNQLTFSEVSAEDHTAQ MLDILQGLNRCVKAGKIRHCGLSDDTPWGINTYLKLSEKHDLPRMVSIQNEFSLLHAKDWPYLIENCIHEDIAYLPWSPL AGGMLSGKYLNGARPEGSRWTLEQRNGLFRDTPAAQKAISAYAEIAKQNGFTPAQLALAWCNQVDGVTSTIIGATNINQL QDDIKAFSMPLNQQALIDIESVFKTYPVPF
Sequences:
>Translated_350_residues MEFTTLGSSGLPISKVCLGSMTWGLQNNQQDANQQIDYAISQGINFIDTAEMYAVPPSPDTYGKTESILGNWLAENKNKR KDLIIATKIAGAGVPWIRDGGPITGDAVVAAVDASLKRLQTDYIDLYQLHWPNRTSPHFNKHWPNQLTFSEVSAEDHTAQ MLDILQGLNRCVKAGKIRHCGLSDDTPWGINTYLKLSEKHDLPRMVSIQNEFSLLHAKDWPYLIENCIHEDIAYLPWSPL AGGMLSGKYLNGARPEGSRWTLEQRNGLFRDTPAAQKAISAYAEIAKQNGFTPAQLALAWCNQVDGVTSTIIGATNINQL QDDIKAFSMPLNQQALIDIESVFKTYPVPF >Mature_350_residues MEFTTLGSSGLPISKVCLGSMTWGLQNNQQDANQQIDYAISQGINFIDTAEMYAVPPSPDTYGKTESILGNWLAENKNKR KDLIIATKIAGAGVPWIRDGGPITGDAVVAAVDASLKRLQTDYIDLYQLHWPNRTSPHFNKHWPNQLTFSEVSAEDHTAQ MLDILQGLNRCVKAGKIRHCGLSDDTPWGINTYLKLSEKHDLPRMVSIQNEFSLLHAKDWPYLIENCIHEDIAYLPWSPL AGGMLSGKYLNGARPEGSRWTLEQRNGLFRDTPAAQKAISAYAEIAKQNGFTPAQLALAWCNQVDGVTSTIIGATNINQL QDDIKAFSMPLNQQALIDIESVFKTYPVPF
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=359, Percent_Identity=27.5766016713092, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI4504825, Length=357, Percent_Identity=27.4509803921569, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI27436964, Length=358, Percent_Identity=26.2569832402235, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI27436962, Length=358, Percent_Identity=26.2569832402235, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI27436966, Length=358, Percent_Identity=26.2569832402235, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI27436971, Length=361, Percent_Identity=26.8698060941828, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI223718702, Length=336, Percent_Identity=24.4047619047619, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI41327764, Length=354, Percent_Identity=24.2937853107345, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789199, Length=354, Percent_Identity=43.2203389830509, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI87081735, Length=361, Percent_Identity=27.7008310249307, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1789375, Length=338, Percent_Identity=28.1065088757396, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788070, Length=356, Percent_Identity=25.8426966292135, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788081, Length=346, Percent_Identity=25.7225433526012, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=371, Percent_Identity=24.2587601078167, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319958, Length=340, Percent_Identity=23.2352941176471, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=357, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=359, Percent_Identity=22.5626740947075, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24644950, Length=328, Percent_Identity=26.5243902439024, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38819; Mature: 38819
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFTTLGSSGLPISKVCLGSMTWGLQNNQQDANQQIDYAISQGINFIDTAEMYAVPPSPD CCEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEECCCCC TYGKTESILGNWLAENKNKRKDLIIATKIAGAGVPWIRDGGPITGDAVVAAVDASLKRLQ CCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHH TDYIDLYQLHWPNRTSPHFNKHWPNQLTFSEVSAEDHTAQMLDILQGLNRCVKAGKIRHC HHHHHEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC GLSDDTPWGINTYLKLSEKHDLPRMVSIQNEFSLLHAKDWPYLIENCIHEDIAYLPWSPL CCCCCCCCCCCCEEEECCCCCCCHHEECCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC AGGMLSGKYLNGARPEGSRWTLEQRNGLFRDTPAAQKAISAYAEIAKQNGFTPAQLALAW CCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH CNQVDGVTSTIIGATNINQLQDDIKAFSMPLNQQALIDIESVFKTYPVPF HHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEFTTLGSSGLPISKVCLGSMTWGLQNNQQDANQQIDYAISQGINFIDTAEMYAVPPSPD CCEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEECCCCC TYGKTESILGNWLAENKNKRKDLIIATKIAGAGVPWIRDGGPITGDAVVAAVDASLKRLQ CCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHH TDYIDLYQLHWPNRTSPHFNKHWPNQLTFSEVSAEDHTAQMLDILQGLNRCVKAGKIRHC HHHHHEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC GLSDDTPWGINTYLKLSEKHDLPRMVSIQNEFSLLHAKDWPYLIENCIHEDIAYLPWSPL CCCCCCCCCCCCEEEECCCCCCCHHEECCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC AGGMLSGKYLNGARPEGSRWTLEQRNGLFRDTPAAQKAISAYAEIAKQNGFTPAQLALAW CCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH CNQVDGVTSTIIGATNINQLQDDIKAFSMPLNQQALIDIESVFKTYPVPF HHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]