Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is pphA [H]
Identifier: 119946785
GI number: 119946785
Start: 3913470
End: 3913775
Strand: Reverse
Name: pphA [H]
Synonym: Ping_3178
Alternate gene names: 119946785
Gene position: 3913775-3913470 (Counterclockwise)
Preceding gene: 119946787
Following gene: 119946784
Centisome position: 85.84
GC content: 35.95
Gene sequence:
>306_bases ATGTTGAATAATGAGAGTATACCCGTTCATTGTTATTATTCCCGCAATAGTGCGAAACGAGATTTTTTTGTTGGTGATAG TCATGGAAAATATTCACTTTTGATGCAACCTCTCAAGAAGATTAGCTTTGATCTGAGTGCCGATCGATTATTCTCCGTAG ACAATATTATTGACCGGGGAGAAGGGTCTTTTAACTGCCTAAAACTGGCGAAAAAAGAATGGTTTATTCCTGTTCTGGGT AACCACGAGCAATTTTTACTCAAGATGGAAAACGCTCATCTTATAACAAAATCAATTGTTATTTAA
Upstream 100 bases:
>100_bases TCTTCTGTCCGATCCCACTGTATTTATTATTTATTTCAGTTTGCACTAAATTAAAGGTGTTATTGCTCGTAGATCTGTCG GTAATGCAAGGAGAGAGCAA
Downstream 100 bases:
>100_bases ATGGTGCTGTTTGGTGGGAGGCATTAAATGAGGAGCAAAGGATATGAGCAAAGCGCATTGTCGAAAGAAACTATATTTGA CTTTGACGGTTGCAACTCTC
Product: serine/threonine protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MLNNESIPVHCYYSRNSAKRDFFVGDSHGKYSLLMQPLKKISFDLSADRLFSVDNIIDRGEGSFNCLKLAKKEWFIPVLG NHEQFLLKMENAHLITKSIVI
Sequences:
>Translated_101_residues MLNNESIPVHCYYSRNSAKRDFFVGDSHGKYSLLMQPLKKISFDLSADRLFSVDNIIDRGEGSFNCLKLAKKEWFIPVLG NHEQFLLKMENAHLITKSIVI >Mature_101_residues MLNNESIPVHCYYSRNSAKRDFFVGDSHGKYSLLMQPLKKISFDLSADRLFSVDNIIDRGEGSFNCLKLAKKEWFIPVLG NHEQFLLKMENAHLITKSIVI
Specific function: Can hydrolyze phosphorylated Ser-, Thr- or Tyr- substrates in vitro. The natural substrate is unknown [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPP phosphatase family. PP-1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 11634; Mature: 11634
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNESIPVHCYYSRNSAKRDFFVGDSHGKYSLLMQPLKKISFDLSADRLFSVDNIIDRG CCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECHHHHHHCC EGSFNCLKLAKKEWFIPVLGNHEQFLLKMENAHLITKSIVI CCCCHHHEECHHHEEEEEECCCCEEEEEECCCEEEEEEECC >Mature Secondary Structure MLNNESIPVHCYYSRNSAKRDFFVGDSHGKYSLLMQPLKKISFDLSADRLFSVDNIIDRG CCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECHHHHHHCC EGSFNCLKLAKKEWFIPVLGNHEQFLLKMENAHLITKSIVI CCCCHHHEECHHHEEEEEECCCCEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11717262; 11677609 [H]