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The map label for this gene is glpQ [H]

Identifier: 119946784

GI number: 119946784

Start: 3911654

End: 3912733

Strand: Reverse

Name: glpQ [H]

Synonym: Ping_3177

Alternate gene names: 119946784

Gene position: 3912733-3911654 (Counterclockwise)

Preceding gene: 119946785

Following gene: 119946781

Centisome position: 85.81

GC content: 39.63

Gene sequence:

>1080_bases
ATGTTCAAAAAATTATCAAATAAGAAAAAAACACTGATGAGTTTACTGATGATTTCATCAGCAGCAAGTTTTGCTCAGGT
TGAAAAAATAGTTGTCGCCCATCGCGGTGCCAGCGGTTATCTTCCTGAGCACAGTATGGAGGCTAAATCGATGGCTTATG
CCATGGACGCTGACTACATTGAACAGGATGTAGTGATGAGCAGTGATGATTTCTTAGTCGTACTGCACGATCATTATCTG
GATCGTGTTACTAACGTCGCAGATATATACCCTGATCGCCAACGTAAAGACGGCAGATATTACGCTATTGATTTTACTTT
GGCAGAAATCAAAGGTCTTAAAATGACCGAAGCATTTAATATTAAAGATGGAGAGCAAACGGCTGTTTACGCACAGCGTT
TTCCAATTTGGAAATCTGACTTTAAGGTGCATACTTTAGAAGATGAAATAGAAATGATTCAAGGTTTAAACAAAAGTACA
GGTAAAAATATCGGTATCTATCCTGAAATTAAAGCGCCGTGGTTTCATCGACACGAGGGCAAAGACATAAGCGTAGCGGT
ATTAAAAGTGCTTAAAAAATACGGTTATACCAGTAAAACTGATTTGGTCTACTTTCAGTCTTTTGATGCCGAGGAGTTAA
AGCGTATTAAATATGATCTGCTTCCAAAATTGTCTATGGATATCAAGTTAGTGCAGTTAATAGCCGAAACAAGCTGGGAT
GAAACCATGGTGTATGTCGATGGTAAAGCTATTGCTTATGACTATGACTGGATGTTTAAGCCGGGTGCAATGAAAGAAAT
AGCTAAATATGCCGATGGTGTGGGCCCCTGGTATCCTATGGTGGTTGCACCCGAGTCGAAAAAAGGGAAGTTAATATTCA
CCTCTCTTGTTAAGGAAGCACATCAGGCCGGTATGCAGGTTCACCCTTATACCTTTAGGCTGGATGAAGGACAAATTCCA
GAGTATGCGCAGGATTTTGAAGAATTCTTAGATATTTTCTATAATAAAGCAGACGTTGACGGGGTATTTAGTGATTACCC
GGATCGTGCGGTTAACTTTTTACAAGCACAAAAAAAGTGA

Upstream 100 bases:

>100_bases
TAATAGAAGTTTAATAGTGGCCAGTTAAAATGGCCTATAGAAAGTTAGGGAGCAGTGTCTGAGCAAGCTTGTATATTTAA
TCATAAGGAATAATGAAACT

Downstream 100 bases:

>100_bases
GTCTTACCGTTAATTAATAGTAAGCACTTATCAAAATGATAAGTGCTTACTACTTTAGCGCTCCTTTGGAACCACTTCAA
ATGGAATCTTGTGCGCTTTT

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFKKLSNKKKTLMSLLMISSAASFAQVEKIVVAHRGASGYLPEHSMEAKSMAYAMDADYIEQDVVMSSDDFLVVLHDHYL
DRVTNVADIYPDRQRKDGRYYAIDFTLAEIKGLKMTEAFNIKDGEQTAVYAQRFPIWKSDFKVHTLEDEIEMIQGLNKST
GKNIGIYPEIKAPWFHRHEGKDISVAVLKVLKKYGYTSKTDLVYFQSFDAEELKRIKYDLLPKLSMDIKLVQLIAETSWD
ETMVYVDGKAIAYDYDWMFKPGAMKEIAKYADGVGPWYPMVVAPESKKGKLIFTSLVKEAHQAGMQVHPYTFRLDEGQIP
EYAQDFEEFLDIFYNKADVDGVFSDYPDRAVNFLQAQKK

Sequences:

>Translated_359_residues
MFKKLSNKKKTLMSLLMISSAASFAQVEKIVVAHRGASGYLPEHSMEAKSMAYAMDADYIEQDVVMSSDDFLVVLHDHYL
DRVTNVADIYPDRQRKDGRYYAIDFTLAEIKGLKMTEAFNIKDGEQTAVYAQRFPIWKSDFKVHTLEDEIEMIQGLNKST
GKNIGIYPEIKAPWFHRHEGKDISVAVLKVLKKYGYTSKTDLVYFQSFDAEELKRIKYDLLPKLSMDIKLVQLIAETSWD
ETMVYVDGKAIAYDYDWMFKPGAMKEIAKYADGVGPWYPMVVAPESKKGKLIFTSLVKEAHQAGMQVHPYTFRLDEGQIP
EYAQDFEEFLDIFYNKADVDGVFSDYPDRAVNFLQAQKK
>Mature_359_residues
MFKKLSNKKKTLMSLLMISSAASFAQVEKIVVAHRGASGYLPEHSMEAKSMAYAMDADYIEQDVVMSSDDFLVVLHDHYL
DRVTNVADIYPDRQRKDGRYYAIDFTLAEIKGLKMTEAFNIKDGEQTAVYAQRFPIWKSDFKVHTLEDEIEMIQGLNKST
GKNIGIYPEIKAPWFHRHEGKDISVAVLKVLKKYGYTSKTDLVYFQSFDAEELKRIKYDLLPKLSMDIKLVQLIAETSWD
ETMVYVDGKAIAYDYDWMFKPGAMKEIAKYADGVGPWYPMVVAPESKKGKLIFTSLVKEAHQAGMQVHPYTFRLDEGQIP
EYAQDFEEFLDIFYNKADVDGVFSDYPDRAVNFLQAQKK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=347, Percent_Identity=61.0951008645533, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41255; Mature: 41255

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLSNKKKTLMSLLMISSAASFAQVEKIVVAHRGASGYLPEHSMEAKSMAYAMDADYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCHHHH
EQDVVMSSDDFLVVLHDHYLDRVTNVADIYPDRQRKDGRYYAIDFTLAEIKGLKMTEAFN
HHHHEECCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHCCCEEEEEEC
IKDGEQTAVYAQRFPIWKSDFKVHTLEDEIEMIQGLNKSTGKNIGIYPEIKAPWFHRHEG
CCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
KDISVAVLKVLKKYGYTSKTDLVYFQSFDAEELKRIKYDLLPKLSMDIKLVQLIAETSWD
CCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ETMVYVDGKAIAYDYDWMFKPGAMKEIAKYADGVGPWYPMVVAPESKKGKLIFTSLVKEA
CEEEEECCEEEEEECCCEECCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHH
HQAGMQVHPYTFRLDEGQIPEYAQDFEEFLDIFYNKADVDGVFSDYPDRAVNFLQAQKK
HHCCCEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFKKLSNKKKTLMSLLMISSAASFAQVEKIVVAHRGASGYLPEHSMEAKSMAYAMDADYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCHHHH
EQDVVMSSDDFLVVLHDHYLDRVTNVADIYPDRQRKDGRYYAIDFTLAEIKGLKMTEAFN
HHHHEECCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHCCCEEEEEEC
IKDGEQTAVYAQRFPIWKSDFKVHTLEDEIEMIQGLNKSTGKNIGIYPEIKAPWFHRHEG
CCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
KDISVAVLKVLKKYGYTSKTDLVYFQSFDAEELKRIKYDLLPKLSMDIKLVQLIAETSWD
CCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ETMVYVDGKAIAYDYDWMFKPGAMKEIAKYADGVGPWYPMVVAPESKKGKLIFTSLVKEA
CEEEEECCEEEEEECCCEECCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHH
HQAGMQVHPYTFRLDEGQIPEYAQDFEEFLDIFYNKADVDGVFSDYPDRAVNFLQAQKK
HHCCCEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]