Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946729
Identifier: 119946729
GI number: 119946729
Start: 3831927
End: 3833432
Strand: Reverse
Name: 119946729
Synonym: Ping_3113
Alternate gene names: NA
Gene position: 3833432-3831927 (Counterclockwise)
Preceding gene: 119946730
Following gene: 119946728
Centisome position: 84.07
GC content: 31.54
Gene sequence:
>1506_bases ATGACCTATCAAAATAATATTGTATCTATAAAAGTTGGAGCACCTGAGAGCACTGGGTTTGCTTTCAAAAGTGCTTGTGG AAAAAGCAAGTATGTTATTACTTCAAAGCATAGTATTTGCATTGATAAGCCAAGTTGTAAGCTTATATCTTCAGGAGTAA ATGCATGTAGGAGTTGTCCTGCAAACATTGATAATTCACAAATTACAATCAAATTTCAAGATCGAGAACCAGTTAAAGCT ATAGCTTCTTTTAAATCAGACAAATCAGATGTTGCTCTGTTAGAACTAGAAAGTGAACAACCTGGCTTAGAATTATTGAA GTGCTCTTTTGATGATGCTAATGATTATTTGATGTGGAAACATGACAAAGCTTGTATTCTCTTAGATAATAAGAGAGTAA AAGAACAGTCGTATGTTTTATATAATTTGAAAAGTTCAACTTTCTCTGATTTTTTACCTAAGAGTCAAGTTATACCTGGG TATTCTGGAACACCAATATTTTCAATTGACACAAATAACACTCCAACTATTCACGCGATTCTGACTGATAACGAGGAAAA CAACGATATTGGTGCAGAATTAATTACTCGTGAGCTACTCCATGAACTTTCCTTAAAATCATCTATTACAATAAACTATA ACTTTAGTTTATTGTCTAAAAATATAAGTACTTCATTTATTGATACTTGTTTTGATTTTTATTACGAACATAATCTAGAA AATAATAATAAAATCAAAGTATATTCACTTCCATTTTCTGATTCTAACAAGTTTGATTTATCAAAAATTGTTGACTATTT GACTGAAAATATGAGTAGAAGTGTATTTCCACCCAGAGAAGTTGAATTGTCGCAAGGTGATCAAATGAAAGTGTTTGAAG CCTTCAATAAATTCCTATCTGAGCCTCAAGATATATATAGTAAGCCAGCATTACTACAAAATTTGGTTGAGTCCGATCTT TTAGCCCCAACGTTATATAAATCAACGAAACAGAATGAATTCAGCTCCATTCATATCAGAGAGTTCCTTCCTGAAAAATT TGAATTCGTGATGACTAAATTCTTTAGTGATAGCGATCTTGTTGAAGCGGTTGATAAATGTGCCAACTCCTTAATTGATG CTAACAATAATGCAAGTGGAAGCTCCTTGCTACTTGAGCAAAGCTTCGTTCAGCAATCAGTATCAATTAAATATGCAGAT TTAATTTCTAAGTTAATACTGCCAGAAAATGAAATGCATGTTGAATATAACTTTGGCTTATTAAGTACTTACAGATTAGA TATTGATTCTGATGTCTATAGTGTAAGAAACTTGAATGATAAGAAGCAAGCGATAAAAGATAACATAATGGTTCACTTAA AAGATAAGCATGCAATGATTTCTTCTATATTTGATGAACATCTATTTATGGGGAAAACATGTTATCTGTACTTGATTCCG ATCAATGAGGTCGGAGAGTTAAATAAATTGATGCATGCTAAAATCAATTCAAATATAAACGGTTGA
Upstream 100 bases:
>100_bases TTTATACACTTTACCTCGGAGAGCGACAGGATCAAAACTTTTACACAATCATTTGAAGACAGATGCCATTTCCCATTGGA TAATGCCTTAGAGTTCACAT
Downstream 100 bases:
>100_bases TATATGAGTGCTAATATAACTTTAATAGATAAATTAACCACAGACTCAATTAAAAGCGTTCATTTTAATGCTTTATATCA AACACTTTCGATTGCTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTYQNNIVSIKVGAPESTGFAFKSACGKSKYVITSKHSICIDKPSCKLISSGVNACRSCPANIDNSQITIKFQDREPVKA IASFKSDKSDVALLELESEQPGLELLKCSFDDANDYLMWKHDKACILLDNKRVKEQSYVLYNLKSSTFSDFLPKSQVIPG YSGTPIFSIDTNNTPTIHAILTDNEENNDIGAELITRELLHELSLKSSITINYNFSLLSKNISTSFIDTCFDFYYEHNLE NNNKIKVYSLPFSDSNKFDLSKIVDYLTENMSRSVFPPREVELSQGDQMKVFEAFNKFLSEPQDIYSKPALLQNLVESDL LAPTLYKSTKQNEFSSIHIREFLPEKFEFVMTKFFSDSDLVEAVDKCANSLIDANNNASGSSLLLEQSFVQQSVSIKYAD LISKLILPENEMHVEYNFGLLSTYRLDIDSDVYSVRNLNDKKQAIKDNIMVHLKDKHAMISSIFDEHLFMGKTCYLYLIP INEVGELNKLMHAKINSNING
Sequences:
>Translated_501_residues MTYQNNIVSIKVGAPESTGFAFKSACGKSKYVITSKHSICIDKPSCKLISSGVNACRSCPANIDNSQITIKFQDREPVKA IASFKSDKSDVALLELESEQPGLELLKCSFDDANDYLMWKHDKACILLDNKRVKEQSYVLYNLKSSTFSDFLPKSQVIPG YSGTPIFSIDTNNTPTIHAILTDNEENNDIGAELITRELLHELSLKSSITINYNFSLLSKNISTSFIDTCFDFYYEHNLE NNNKIKVYSLPFSDSNKFDLSKIVDYLTENMSRSVFPPREVELSQGDQMKVFEAFNKFLSEPQDIYSKPALLQNLVESDL LAPTLYKSTKQNEFSSIHIREFLPEKFEFVMTKFFSDSDLVEAVDKCANSLIDANNNASGSSLLLEQSFVQQSVSIKYAD LISKLILPENEMHVEYNFGLLSTYRLDIDSDVYSVRNLNDKKQAIKDNIMVHLKDKHAMISSIFDEHLFMGKTCYLYLIP INEVGELNKLMHAKINSNING >Mature_500_residues TYQNNIVSIKVGAPESTGFAFKSACGKSKYVITSKHSICIDKPSCKLISSGVNACRSCPANIDNSQITIKFQDREPVKAI ASFKSDKSDVALLELESEQPGLELLKCSFDDANDYLMWKHDKACILLDNKRVKEQSYVLYNLKSSTFSDFLPKSQVIPGY SGTPIFSIDTNNTPTIHAILTDNEENNDIGAELITRELLHELSLKSSITINYNFSLLSKNISTSFIDTCFDFYYEHNLEN NNKIKVYSLPFSDSNKFDLSKIVDYLTENMSRSVFPPREVELSQGDQMKVFEAFNKFLSEPQDIYSKPALLQNLVESDLL APTLYKSTKQNEFSSIHIREFLPEKFEFVMTKFFSDSDLVEAVDKCANSLIDANNNASGSSLLLEQSFVQQSVSIKYADL ISKLILPENEMHVEYNFGLLSTYRLDIDSDVYSVRNLNDKKQAIKDNIMVHLKDKHAMISSIFDEHLFMGKTCYLYLIPI NEVGELNKLMHAKINSNING
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56714; Mature: 56583
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYQNNIVSIKVGAPESTGFAFKSACGKSKYVITSKHSICIDKPSCKLISSGVNACRSCP CCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHCCC ANIDNSQITIKFQDREPVKAIASFKSDKSDVALLELESEQPGLELLKCSFDDANDYLMWK CCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEE HDKACILLDNKRVKEQSYVLYNLKSSTFSDFLPKSQVIPGYSGTPIFSIDTNNTPTIHAI CCCEEEEECCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEE LTDNEENNDIGAELITRELLHELSLKSSITINYNFSLLSKNISTSFIDTCFDFYYEHNLE EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHEEECCCCCHHHHHHHHHHHHHCCCC NNNKIKVYSLPFSDSNKFDLSKIVDYLTENMSRSVFPPREVELSQGDQMKVFEAFNKFLS CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHC EPQDIYSKPALLQNLVESDLLAPTLYKSTKQNEFSSIHIREFLPEKFEFVMTKFFSDSDL CCHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHCCCCHH VEAVDKCANSLIDANNNASGSSLLLEQSFVQQSVSIKYADLISKLILPENEMHVEYNFGL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCE LSTYRLDIDSDVYSVRNLNDKKQAIKDNIMVHLKDKHAMISSIFDEHLFMGKTCYLYLIP EEEEEEECCCCHHHHHCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEE INEVGELNKLMHAKINSNING CCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TYQNNIVSIKVGAPESTGFAFKSACGKSKYVITSKHSICIDKPSCKLISSGVNACRSCP CCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHCCC ANIDNSQITIKFQDREPVKAIASFKSDKSDVALLELESEQPGLELLKCSFDDANDYLMWK CCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEE HDKACILLDNKRVKEQSYVLYNLKSSTFSDFLPKSQVIPGYSGTPIFSIDTNNTPTIHAI CCCEEEEECCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEE LTDNEENNDIGAELITRELLHELSLKSSITINYNFSLLSKNISTSFIDTCFDFYYEHNLE EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHEEECCCCCHHHHHHHHHHHHHCCCC NNNKIKVYSLPFSDSNKFDLSKIVDYLTENMSRSVFPPREVELSQGDQMKVFEAFNKFLS CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHC EPQDIYSKPALLQNLVESDLLAPTLYKSTKQNEFSSIHIREFLPEKFEFVMTKFFSDSDL CCHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHCCCCHH VEAVDKCANSLIDANNNASGSSLLLEQSFVQQSVSIKYADLISKLILPENEMHVEYNFGL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCE LSTYRLDIDSDVYSVRNLNDKKQAIKDNIMVHLKDKHAMISSIFDEHLFMGKTCYLYLIP EEEEEEECCCCHHHHHCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEE INEVGELNKLMHAKINSNING CCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA