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The map label for this gene is tnsC [H]

Identifier: 119946723

GI number: 119946723

Start: 3820109

End: 3821581

Strand: Reverse

Name: tnsC [H]

Synonym: Ping_3107

Alternate gene names: 119946723

Gene position: 3821581-3820109 (Counterclockwise)

Preceding gene: 119946724

Following gene: 119946722

Centisome position: 83.81

GC content: 41.68

Gene sequence:

>1473_bases
ATGGCTATTAAGAATAAAAAATTACCAGTGACAATAACCCCCGCGCAATACCGCGATACGGAAGTTGAAGCATATAAAAA
CAACCCATTGATACTTGGGTTACCCAATAGAGTCGATCCAAAGCGATTTAGGCAAGTGTTAAGTCAAAGAGTTCCTTCTC
CTGAATTCAGCCATCTTTTGGATTCTGACCGGGTTGAAGTGATAAAGCAATTGCGTAAAACCCGTATTATTACGACTGAA
CATTTAGATTTGTATAACGAATTGTATGATGCGCTTAGTCATGGCTATGTTGATCGGAATCCCAGCAGGCCGGAGGTAGT
CGCATGGAGCTATGATATAGCCGACAATACTATTCCATTAGAGAATATAGAAAGGCCTTATTTAGATGCAATATCGGCTC
AAACAACGGCTGATGCTATATTTGTAACAGGGTTCACTGGTAATGGTAAATCAACCATTAATAATCTCATTATGACGGCG
CTCTTTCCAATGGTTATTGAACATCACTGGGAGGGGTTTAATGAGCCTCAGATTGTGTTTATTAAGGTAGACATGCCCCA
TAACGGCAGTCGTGCGGTCCTTATTGAACGAATATTACAAGAGGTTGATAGAGCGTTAGCGGAGACAAGCTTTGGCAAAA
CAAATTATGCTGCGACTTGTAAAACTAAGGGTGGAAAATATACAGATATCTCCAGTATGGAAGGGGTCTTATTAACAGTA
TTAAATCGCCATCATGTTGGACTGCTTATTATTGATGAATTTCAAAACCTACAAGTCGCCTCTGTTAGGTTTAGAAACGA
AATGCTGCAATTTTTCGACACCTTAATTAATCAGCTCGCGGTGCCAAATATTAAAATAGGTACACCCGACACCATATTGT
TATTCGACTCCCAAGGCCGCCACAAGCGGCGAATTGGAATGGTGCTTGAACTTATGCGCTTTGAAGGCGAAAAGGATTGG
GACCGCGCGATGAAAGCTATTTTCGGCTTTCAGCCTATTGATAAGCCTATTAAACGCAATGAAAATATTGAAGCGCTTCT
CCACGATTTAAGCGCAGGAGTCCCCTCTATATTAATGGCATTATGGGAGGGCTGCCTGATTGAAGCTGTACGCTCTGGTT
GTGAAACAGTTACTCAAGCGCTAATTAAGCGTGTTTTTAAAAAGCGTTTCCCGCTTATGCGCTCTGTAACTCGTAATATT
AACAAAGGTACTAAAGGTCGGCATTCTGATTTATTGACAGTGCAACAATATTTAGACGCAGGCAATCGCACGCTTGCCTT
AAAACATTTGAACCACTTTGCTGTGAACGTTCAAGGGCCGGCGGCACAAGCGGTTAAGCAAGATATTGATGCGCTTATCG
AACAGCAAGAGTTCTCGCTAGCTCAATTGAAAAAATTGGATGCCATCAAATTAGGGTTAAAAAAGAATGCTACCGGTCAT
CGAGAGCCGCAAACCTTAGAGCACAATGAATGA

Upstream 100 bases:

>100_bases
TCACACAACAGCAGGTTTTACCCCAGATAAAAAATCCCCCTTATGATCAAGATGTTTCTGAACACAAGGGATACGCAGAA
TTTGATGAGGATGATGAATA

Downstream 100 bases:

>100_bases
TGCGAATGCCTGATTTGATGTGCGATGAGCATCTTTATAGCGGCTTTATTCGAGGTCGATTTTTAAGTGGGCAGATGCAT
TTAAGTGTTAAGCGATTTTT

Product: transposon Tn7 transposition protein C

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MAIKNKKLPVTITPAQYRDTEVEAYKNNPLILGLPNRVDPKRFRQVLSQRVPSPEFSHLLDSDRVEVIKQLRKTRIITTE
HLDLYNELYDALSHGYVDRNPSRPEVVAWSYDIADNTIPLENIERPYLDAISAQTTADAIFVTGFTGNGKSTINNLIMTA
LFPMVIEHHWEGFNEPQIVFIKVDMPHNGSRAVLIERILQEVDRALAETSFGKTNYAATCKTKGGKYTDISSMEGVLLTV
LNRHHVGLLIIDEFQNLQVASVRFRNEMLQFFDTLINQLAVPNIKIGTPDTILLFDSQGRHKRRIGMVLELMRFEGEKDW
DRAMKAIFGFQPIDKPIKRNENIEALLHDLSAGVPSILMALWEGCLIEAVRSGCETVTQALIKRVFKKRFPLMRSVTRNI
NKGTKGRHSDLLTVQQYLDAGNRTLALKHLNHFAVNVQGPAAQAVKQDIDALIEQQEFSLAQLKKLDAIKLGLKKNATGH
REPQTLEHNE

Sequences:

>Translated_490_residues
MAIKNKKLPVTITPAQYRDTEVEAYKNNPLILGLPNRVDPKRFRQVLSQRVPSPEFSHLLDSDRVEVIKQLRKTRIITTE
HLDLYNELYDALSHGYVDRNPSRPEVVAWSYDIADNTIPLENIERPYLDAISAQTTADAIFVTGFTGNGKSTINNLIMTA
LFPMVIEHHWEGFNEPQIVFIKVDMPHNGSRAVLIERILQEVDRALAETSFGKTNYAATCKTKGGKYTDISSMEGVLLTV
LNRHHVGLLIIDEFQNLQVASVRFRNEMLQFFDTLINQLAVPNIKIGTPDTILLFDSQGRHKRRIGMVLELMRFEGEKDW
DRAMKAIFGFQPIDKPIKRNENIEALLHDLSAGVPSILMALWEGCLIEAVRSGCETVTQALIKRVFKKRFPLMRSVTRNI
NKGTKGRHSDLLTVQQYLDAGNRTLALKHLNHFAVNVQGPAAQAVKQDIDALIEQQEFSLAQLKKLDAIKLGLKKNATGH
REPQTLEHNE
>Mature_489_residues
AIKNKKLPVTITPAQYRDTEVEAYKNNPLILGLPNRVDPKRFRQVLSQRVPSPEFSHLLDSDRVEVIKQLRKTRIITTEH
LDLYNELYDALSHGYVDRNPSRPEVVAWSYDIADNTIPLENIERPYLDAISAQTTADAIFVTGFTGNGKSTINNLIMTAL
FPMVIEHHWEGFNEPQIVFIKVDMPHNGSRAVLIERILQEVDRALAETSFGKTNYAATCKTKGGKYTDISSMEGVLLTVL
NRHHVGLLIIDEFQNLQVASVRFRNEMLQFFDTLINQLAVPNIKIGTPDTILLFDSQGRHKRRIGMVLELMRFEGEKDWD
RAMKAIFGFQPIDKPIKRNENIEALLHDLSAGVPSILMALWEGCLIEAVRSGCETVTQALIKRVFKKRFPLMRSVTRNIN
KGTKGRHSDLLTVQQYLDAGNRTLALKHLNHFAVNVQGPAAQAVKQDIDALIEQQEFSLAQLKKLDAIKLGLKKNATGHR
EPQTLEHNE

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 55542; Mature: 55411

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKNKKLPVTITPAQYRDTEVEAYKNNPLILGLPNRVDPKRFRQVLSQRVPSPEFSHLL
CCCCCCCCCEEECCCCCCCCCHHEECCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHH
DSDRVEVIKQLRKTRIITTEHLDLYNELYDALSHGYVDRNPSRPEVVAWSYDIADNTIPL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCH
ENIERPYLDAISAQTTADAIFVTGFTGNGKSTINNLIMTALFPMVIEHHWEGFNEPQIVF
HHCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IKVDMPHNGSRAVLIERILQEVDRALAETSFGKTNYAATCKTKGGKYTDISSMEGVLLTV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LNRHHVGLLIIDEFQNLQVASVRFRNEMLQFFDTLINQLAVPNIKIGTPDTILLFDSQGR
HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCC
HKRRIGMVLELMRFEGEKDWDRAMKAIFGFQPIDKPIKRNENIEALLHDLSAGVPSILMA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHH
LWEGCLIEAVRSGCETVTQALIKRVFKKRFPLMRSVTRNINKGTKGRHSDLLTVQQYLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
GNRTLALKHLNHFAVNVQGPAAQAVKQDIDALIEQQEFSLAQLKKLDAIKLGLKKNATGH
CCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
REPQTLEHNE
CCCCCCCCCC
>Mature Secondary Structure 
AIKNKKLPVTITPAQYRDTEVEAYKNNPLILGLPNRVDPKRFRQVLSQRVPSPEFSHLL
CCCCCCCCEEECCCCCCCCCHHEECCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHH
DSDRVEVIKQLRKTRIITTEHLDLYNELYDALSHGYVDRNPSRPEVVAWSYDIADNTIPL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCH
ENIERPYLDAISAQTTADAIFVTGFTGNGKSTINNLIMTALFPMVIEHHWEGFNEPQIVF
HHCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IKVDMPHNGSRAVLIERILQEVDRALAETSFGKTNYAATCKTKGGKYTDISSMEGVLLTV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LNRHHVGLLIIDEFQNLQVASVRFRNEMLQFFDTLINQLAVPNIKIGTPDTILLFDSQGR
HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCC
HKRRIGMVLELMRFEGEKDWDRAMKAIFGFQPIDKPIKRNENIEALLHDLSAGVPSILMA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHH
LWEGCLIEAVRSGCETVTQALIKRVFKKRFPLMRSVTRNINKGTKGRHSDLLTVQQYLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
GNRTLALKHLNHFAVNVQGPAAQAVKQDIDALIEQQEFSLAQLKKLDAIKLGLKKNATGH
CCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
REPQTLEHNE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]