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The map label for this gene is ydhP [H]

Identifier: 119946708

GI number: 119946708

Start: 3797168

End: 3798373

Strand: Reverse

Name: ydhP [H]

Synonym: Ping_3090

Alternate gene names: 119946708

Gene position: 3798373-3797168 (Counterclockwise)

Preceding gene: 119946709

Following gene: 119946706

Centisome position: 83.3

GC content: 43.62

Gene sequence:

>1206_bases
ATGACACCAATTACAACCTTACCTAGCCAATTGAATACCACCGCCATTTTACTGGTTTTAGCGTTAGGCACATTTATTTT
GGGATTATCGGAGTTCTCGATGATGCCAATGCTGCCCTTAATCAGTGAAACATTTGCCTCAACACCGTCACAAAGCGGTT
ATGCTATTAGTGCTTACGCGATAGGGGTTGTTGTTGGGGCACCCATTTTAATGCTGACGACGGCCAACATGAAAAAACGC
GATGTCTTGGCTATTTTTCTGACATTAATGTTTATTGCCAATGGCTTAAGTGCCATGGCAACCTCACTTGAGCAGCTAAT
GGTTTTTCGTTTTTTAAGTGGCCTGCCCCATGGCGCTTACTTTGGTGCCGCCATATTATTAGCCGCAGATATTGCCCCAC
AAAATAAACGCGCCAGCTATATGTCCAAAGTGTTTATGGGCTTAACCATTGCGACTATTGTCGGGGTGCCTATAGTGACA
TTAGTCGGCCAATATTTAAGCTGGCGCTATTGTTTAGCAGGTGCATCTGCTCTCGCCTTAGTGGCACTGGTGTGTGTGTA
TTTAGTGATCCCTAAAATAGAAAATAGCCAGCCGTCAAATTTAATTAATGAATTTGGCGTGTTGAAAAATAAATTGGTCT
GGTCAATTCTAGGTATTGTGATTATTGGCTTTGGCGGCGTATTTTGTATTTACACTTACATTGCCGACACTATTTTAGTG
GTTACCGAAACCCCCGCATACACGATTTCAATCGCGATGGTAATGTTTGGTATTGGTTGTACATTAGGTAACTACGTATT
AGGCAAAGCGGCCGATCGTGCGGCTTTAAAAACCACCGGCATAGCCTTAATTTGTATGATTATATTTTCCCTCGCCTACG
TCAGTGCCAGCCATAATATTTTGCTATTGTATGCGGTGATTTTCTTTATTGGCTGCAGTTTGGGCTTAGCCACCTTAATT
CAAACCTTGCTAATGGATGTATCACCAAACGGCCACGCAATGATAGGTGCTTTGGTGCAGTGCTCATTTAACATTGCCAA
TGCCATCGGGCCTTTGCTGGGCGGCATGGTTATCGCACAAGGAGCATTACCCAACGAGACGGGTTATGTTGCGGCGGTGC
TATTTACTGGCGGCTTAATAATGTGGCTGCTAAGTTATCTGCAAATGAATAACAAAAATGCCCAATTGAAGCAGTGCAGA
GCCTAA

Upstream 100 bases:

>100_bases
GAGGACTTTCAAGCCTTAATGTTGCTTGTCTCTATCGCTATAGGCTTCGCAGTTAAATAGTACCTACCACTATTTTTCTT
TTATCACTTACAGGATTTTT

Downstream 100 bases:

>100_bases
TTAAATTGTCGATAACCTACTCGATGAGATTGCGCTTAATGAACCTATTACGTATATGGGGTCGCGTCTGAATGGCGCTA
TCTTAAGTTATATCTATATG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTPITTLPSQLNTTAILLVLALGTFILGLSEFSMMPMLPLISETFASTPSQSGYAISAYAIGVVVGAPILMLTTANMKKR
DVLAIFLTLMFIANGLSAMATSLEQLMVFRFLSGLPHGAYFGAAILLAADIAPQNKRASYMSKVFMGLTIATIVGVPIVT
LVGQYLSWRYCLAGASALALVALVCVYLVIPKIENSQPSNLINEFGVLKNKLVWSILGIVIIGFGGVFCIYTYIADTILV
VTETPAYTISIAMVMFGIGCTLGNYVLGKAADRAALKTTGIALICMIIFSLAYVSASHNILLLYAVIFFIGCSLGLATLI
QTLLMDVSPNGHAMIGALVQCSFNIANAIGPLLGGMVIAQGALPNETGYVAAVLFTGGLIMWLLSYLQMNNKNAQLKQCR
A

Sequences:

>Translated_401_residues
MTPITTLPSQLNTTAILLVLALGTFILGLSEFSMMPMLPLISETFASTPSQSGYAISAYAIGVVVGAPILMLTTANMKKR
DVLAIFLTLMFIANGLSAMATSLEQLMVFRFLSGLPHGAYFGAAILLAADIAPQNKRASYMSKVFMGLTIATIVGVPIVT
LVGQYLSWRYCLAGASALALVALVCVYLVIPKIENSQPSNLINEFGVLKNKLVWSILGIVIIGFGGVFCIYTYIADTILV
VTETPAYTISIAMVMFGIGCTLGNYVLGKAADRAALKTTGIALICMIIFSLAYVSASHNILLLYAVIFFIGCSLGLATLI
QTLLMDVSPNGHAMIGALVQCSFNIANAIGPLLGGMVIAQGALPNETGYVAAVLFTGGLIMWLLSYLQMNNKNAQLKQCR
A
>Mature_400_residues
TPITTLPSQLNTTAILLVLALGTFILGLSEFSMMPMLPLISETFASTPSQSGYAISAYAIGVVVGAPILMLTTANMKKRD
VLAIFLTLMFIANGLSAMATSLEQLMVFRFLSGLPHGAYFGAAILLAADIAPQNKRASYMSKVFMGLTIATIVGVPIVTL
VGQYLSWRYCLAGASALALVALVCVYLVIPKIENSQPSNLINEFGVLKNKLVWSILGIVIIGFGGVFCIYTYIADTILVV
TETPAYTISIAMVMFGIGCTLGNYVLGKAADRAALKTTGIALICMIIFSLAYVSASHNILLLYAVIFFIGCSLGLATLIQ
TLLMDVSPNGHAMIGALVQCSFNIANAIGPLLGGMVIAQGALPNETGYVAAVLFTGGLIMWLLSYLQMNNKNAQLKQCRA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=273, Percent_Identity=35.8974358974359, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1786595, Length=364, Percent_Identity=28.8461538461538, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1787808, Length=154, Percent_Identity=31.1688311688312, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42502; Mature: 42370

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPITTLPSQLNTTAILLVLALGTFILGLSEFSMMPMLPLISETFASTPSQSGYAISAYA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
IGVVVGAPILMLTTANMKKRDVLAIFLTLMFIANGLSAMATSLEQLMVFRFLSGLPHGAY
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH
FGAAILLAADIAPQNKRASYMSKVFMGLTIATIVGVPIVTLVGQYLSWRYCLAGASALAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVCVYLVIPKIENSQPSNLINEFGVLKNKLVWSILGIVIIGFGGVFCIYTYIADTILV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VTETPAYTISIAMVMFGIGCTLGNYVLGKAADRAALKTTGIALICMIIFSLAYVSASHNI
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLLYAVIFFIGCSLGLATLIQTLLMDVSPNGHAMIGALVQCSFNIANAIGPLLGGMVIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GALPNETGYVAAVLFTGGLIMWLLSYLQMNNKNAQLKQCRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
TPITTLPSQLNTTAILLVLALGTFILGLSEFSMMPMLPLISETFASTPSQSGYAISAYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
IGVVVGAPILMLTTANMKKRDVLAIFLTLMFIANGLSAMATSLEQLMVFRFLSGLPHGAY
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH
FGAAILLAADIAPQNKRASYMSKVFMGLTIATIVGVPIVTLVGQYLSWRYCLAGASALAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVCVYLVIPKIENSQPSNLINEFGVLKNKLVWSILGIVIIGFGGVFCIYTYIADTILV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VTETPAYTISIAMVMFGIGCTLGNYVLGKAADRAALKTTGIALICMIIFSLAYVSASHNI
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLLYAVIFFIGCSLGLATLIQTLLMDVSPNGHAMIGALVQCSFNIANAIGPLLGGMVIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GALPNETGYVAAVLFTGGLIMWLLSYLQMNNKNAQLKQCRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]