Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946709
Identifier: 119946709
GI number: 119946709
Start: 3799002
End: 3799982
Strand: Reverse
Name: 119946709
Synonym: Ping_3091
Alternate gene names: NA
Gene position: 3799982-3799002 (Counterclockwise)
Preceding gene: 119946710
Following gene: 119946708
Centisome position: 83.34
GC content: 43.83
Gene sequence:
>981_bases ATGATGGCCAAACCAAGAAAAACCATAGTGAGCTTAGATGACACGCCTTACTATCACTGCTGTTCACGTGTTGTGCGTAA AGCATTCTTGTGTGGTATTGATAGTGCAACAGGTGAAAACTATGAACATCGTCGAGAGTGGGTTGACTCTCGTATTGTTG AGCTTGCCACCATCTTTGCGATTGATATCTGTGCTTATGCTGTCATGAGTAATCACCTGCATGTTGTCCTTAAAGTGAAT GCTGATAAAGCCGTAAACTGGTCTGATAAAGCAGTGCTTGTTCAATGGCATAAAGGCTTTAAAGGCACGTTACTGACGCA GAAATTTATTAAAGGTGAAGACCTTAATACATTTGAGCTTGAAACCGTTAATGACTGCATTACCGAATATCGTCGACGTT TAATCGATATTAGCTGGTTTATGCGCTCACTCAGTGAGCCGATTGCAAGACAGGCCAACAAAGAAGATAGCTGTACTGGC AGATTCTGGGAAGGACGCTTTAAATCTCAGGCATTACTCGATGAAACAGCCGTATTAGCTTGTATGGCGTATGTTGATTT GAATCCTATTCGCGCCAAAATAGCGACGACACCTGAAACCTCAGATCACACCAGCATCCAACGCCGAATTCACTCCGCCA TAAAAGGTGAGCAACCAGCAGAATTACTGCTGTTTGTAGGTGATGAACGCCTTAATATGCCTGACGGGCTTATGTTCAGT GTGAAGGATTACATTGTGCTTGTTGAAGATACCGGTCGAATCATACGAGAAGATAAGCGTGGTGCCATCAGCTCAAGCAG CCAACACATTCTAAACCGACTTAATATTCCGACAGAGAACTGGCTTAAAATTAGCACTGAATTTGGTCATTTATTTAAAG GGGCGGTAGGTGCCTTACCCGCATTAACCGAATACTGTGAACATTTAGACCGCAAGCGACGCCACGGTGCAGCAAACTGT CAACGTTGGTTGCGTGCTTAA
Upstream 100 bases:
>100_bases TGAGGGGTTGAAGAAAGAATAATATAGCCACCCATAATTATTGGCGAATATTTGCGCATTGGTCTAATCTTTAGTTACCT TTATTTACTGCAGGTAATAA
Downstream 100 bases:
>100_bases AGCTTAATTTTTTAACTACCTGTCAGTCATTCGCTCACTTGATTAAAATCAAGATTCTGCTGTTGGTTTAAAAGGACCAT ATTCCTCATATTTGACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MMAKPRKTIVSLDDTPYYHCCSRVVRKAFLCGIDSATGENYEHRREWVDSRIVELATIFAIDICAYAVMSNHLHVVLKVN ADKAVNWSDKAVLVQWHKGFKGTLLTQKFIKGEDLNTFELETVNDCITEYRRRLIDISWFMRSLSEPIARQANKEDSCTG RFWEGRFKSQALLDETAVLACMAYVDLNPIRAKIATTPETSDHTSIQRRIHSAIKGEQPAELLLFVGDERLNMPDGLMFS VKDYIVLVEDTGRIIREDKRGAISSSSQHILNRLNIPTENWLKISTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLRA
Sequences:
>Translated_326_residues MMAKPRKTIVSLDDTPYYHCCSRVVRKAFLCGIDSATGENYEHRREWVDSRIVELATIFAIDICAYAVMSNHLHVVLKVN ADKAVNWSDKAVLVQWHKGFKGTLLTQKFIKGEDLNTFELETVNDCITEYRRRLIDISWFMRSLSEPIARQANKEDSCTG RFWEGRFKSQALLDETAVLACMAYVDLNPIRAKIATTPETSDHTSIQRRIHSAIKGEQPAELLLFVGDERLNMPDGLMFS VKDYIVLVEDTGRIIREDKRGAISSSSQHILNRLNIPTENWLKISTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLRA >Mature_326_residues MMAKPRKTIVSLDDTPYYHCCSRVVRKAFLCGIDSATGENYEHRREWVDSRIVELATIFAIDICAYAVMSNHLHVVLKVN ADKAVNWSDKAVLVQWHKGFKGTLLTQKFIKGEDLNTFELETVNDCITEYRRRLIDISWFMRSLSEPIARQANKEDSCTG RFWEGRFKSQALLDETAVLACMAYVDLNPIRAKIATTPETSDHTSIQRRIHSAIKGEQPAELLLFVGDERLNMPDGLMFS VKDYIVLVEDTGRIIREDKRGAISSSSQHILNRLNIPTENWLKISTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37244; Mature: 37244
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKPRKTIVSLDDTPYYHCCSRVVRKAFLCGIDSATGENYEHRREWVDSRIVELATIFA CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IDICAYAVMSNHLHVVLKVNADKAVNWSDKAVLVQWHKGFKGTLLTQKFIKGEDLNTFEL HHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEH ETVNDCITEYRRRLIDISWFMRSLSEPIARQANKEDSCTGRFWEGRFKSQALLDETAVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHH CMAYVDLNPIRAKIATTPETSDHTSIQRRIHSAIKGEQPAELLLFVGDERLNMPDGLMFS HHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEE VKDYIVLVEDTGRIIREDKRGAISSSSQHILNRLNIPTENWLKISTEFGHLFKGAVGALP EEEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH ALTEYCEHLDRKRRHGAANCQRWLRA HHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MMAKPRKTIVSLDDTPYYHCCSRVVRKAFLCGIDSATGENYEHRREWVDSRIVELATIFA CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IDICAYAVMSNHLHVVLKVNADKAVNWSDKAVLVQWHKGFKGTLLTQKFIKGEDLNTFEL HHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEH ETVNDCITEYRRRLIDISWFMRSLSEPIARQANKEDSCTGRFWEGRFKSQALLDETAVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHH CMAYVDLNPIRAKIATTPETSDHTSIQRRIHSAIKGEQPAELLLFVGDERLNMPDGLMFS HHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEE VKDYIVLVEDTGRIIREDKRGAISSSSQHILNRLNIPTENWLKISTEFGHLFKGAVGALP EEEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH ALTEYCEHLDRKRRHGAANCQRWLRA HHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA