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The map label for this gene is yggU [C]

Identifier: 119946689

GI number: 119946689

Start: 3771297

End: 3771632

Strand: Reverse

Name: yggU [C]

Synonym: Ping_3071

Alternate gene names: 119946689

Gene position: 3771632-3771297 (Counterclockwise)

Preceding gene: 119946690

Following gene: 119946688

Centisome position: 82.72

GC content: 44.05

Gene sequence:

>336_bases
ATGGCATTCGATGGCAAGAGAGTTAAAATGTCTTCATTTTGTGTTATGGAGGGAGAAATACTGGTTGTGAATATTCTTGG
AACACCTGGCGCGAAGAAGGATGCTGTCGGAAAGGCGCAGGGAATTCAGCTGAGGGTTCGTGTTACTGCAACGCCTGTCG
CCGGCAGAGCAACTGATCATATGGTTAGATTTCTCGCGAAAGAATTTAGTGTTTCACCCGATGATATAACAGTTGTTTTT
GGTCGGTTGAACATCAATAAACAGTTGCGTATCAAAGCGCCGAAAAAAATGCCTTCCGTAGTGGCAAAAGCGCTTTCAAA
AAAAGACAGTGCCTAA

Upstream 100 bases:

>100_bases
ACTGGACGCATTACTTTGTCGCTGAAGCAGCAACAATGGCATTTTATACGCTGTTGTTTATGTGGAGAGAGAAGTGAAAA
AAAAAGCAACTAAGGCTGTA

Downstream 100 bases:

>100_bases
TAAGCGTCGTCATGCTTAGAATACCAATTATCCCTATAATACGCTTAAAACAGATAATCCTGCCAATGTACTTTGATGAA
CCCTATCATGTCCCCGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAFDGKRVKMSSFCVMEGEILVVNILGTPGAKKDAVGKAQGIQLRVRVTATPVAGRATDHMVRFLAKEFSVSPDDITVVF
GRLNINKQLRIKAPKKMPSVVAKALSKKDSA

Sequences:

>Translated_111_residues
MAFDGKRVKMSSFCVMEGEILVVNILGTPGAKKDAVGKAQGIQLRVRVTATPVAGRATDHMVRFLAKEFSVSPDDITVVF
GRLNINKQLRIKAPKKMPSVVAKALSKKDSA
>Mature_110_residues
AFDGKRVKMSSFCVMEGEILVVNILGTPGAKKDAVGKAQGIQLRVRVTATPVAGRATDHMVRFLAKEFSVSPDDITVVFG
RLNINKQLRIKAPKKMPSVVAKALSKKDSA

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=86, Percent_Identity=32.5581395348837, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11983; Mature: 11852

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDGKRVKMSSFCVMEGEILVVNILGTPGAKKDAVGKAQGIQLRVRVTATPVAGRATDH
CCCCCCEEEECEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHH
MVRFLAKEFSVSPDDITVVFGRLNINKQLRIKAPKKMPSVVAKALSKKDSA
HHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFDGKRVKMSSFCVMEGEILVVNILGTPGAKKDAVGKAQGIQLRVRVTATPVAGRATDH
CCCCCEEEECEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHH
MVRFLAKEFSVSPDDITVVFGRLNINKQLRIKAPKKMPSVVAKALSKKDSA
HHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA