Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is plsC [H]
Identifier: 119946690
GI number: 119946690
Start: 3771936
End: 3772625
Strand: Reverse
Name: plsC [H]
Synonym: Ping_3072
Alternate gene names: 119946690
Gene position: 3772625-3771936 (Counterclockwise)
Preceding gene: 119946691
Following gene: 119946689
Centisome position: 82.74
GC content: 35.8
Gene sequence:
>690_bases TTGAACCTGAAACAAATACAAATCGCGATTTATTCGTTATTTTTAACCAACAAATTTGGCTTCAAATTAAATAAGGCGAC AACAAATGCTGACAAAAAGAAGCTCCGCTTGGAGTACGCTGTCAGCTTGTTCTCCAAACTTAATATTGAAATCGTGGTTT CTGGCCTCGATAAGGTAAACCCTGACGGACAGTATCTTCTACTTTCTAATCACCGCAGTATTATCGATCCCTGTGTGATT GAAATGGCGTTAAAAGACACTAATGTTTTTGGCTTATGGGTTGCAAAAAAAGAACTCTATAACTCTTTTTTCTTTGGTAA GTTTGTCCGTAATGGAGGCTCTATTTTACTGGATAGAGGCTCAAATAAAATGAGTCAATTCTTTAAAGATATTAAAAAAA GTTTGAGCAATAATGCTTCTATTTTTATATTTCCCGAAGGTACGCGTAATGTGCAGGACACAGACCTTACCGAGTTTAAG AAAGGGACGCAGCTTATCGCGGTTAAAAACAAGTTGCAGATACTGCCTGTATATATAAGAACTAATTCAAATACGGCATT AAAAACAGCGATAAAAAACCGTGAAAAAAAATTACAGATAGAAGTCGAGTTTGGTGATGTGATCGATTATAAAGATAGAA CGATGGATCTTGAGCAGGCATATAGAAACATGTTTGATACACAAGCCTAA
Upstream 100 bases:
>100_bases GTCTAGCTTTCTCCATGCCGCTTTCTGTGGCAGTATACGCACCATTTTGGGTCTTTTTTTATAGTGGAAGTCCCGATGAC ATTTATTTTTGGAGTGTATT
Downstream 100 bases:
>100_bases TCAGTCGGAATCAAATGAAGAGCTGGACCAACAAACTGCCAGGCGCTTTTTTGACCACGGATGTCGAGCGTTAAGACTGT CTAATAACTCACTTTTTATA
Product: 1-acyl-glycerol-3-phosphate acyltransferase PlsC
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNLKQIQIAIYSLFLTNKFGFKLNKATTNADKKKLRLEYAVSLFSKLNIEIVVSGLDKVNPDGQYLLLSNHRSIIDPCVI EMALKDTNVFGLWVAKKELYNSFFFGKFVRNGGSILLDRGSNKMSQFFKDIKKSLSNNASIFIFPEGTRNVQDTDLTEFK KGTQLIAVKNKLQILPVYIRTNSNTALKTAIKNREKKLQIEVEFGDVIDYKDRTMDLEQAYRNMFDTQA
Sequences:
>Translated_229_residues MNLKQIQIAIYSLFLTNKFGFKLNKATTNADKKKLRLEYAVSLFSKLNIEIVVSGLDKVNPDGQYLLLSNHRSIIDPCVI EMALKDTNVFGLWVAKKELYNSFFFGKFVRNGGSILLDRGSNKMSQFFKDIKKSLSNNASIFIFPEGTRNVQDTDLTEFK KGTQLIAVKNKLQILPVYIRTNSNTALKTAIKNREKKLQIEVEFGDVIDYKDRTMDLEQAYRNMFDTQA >Mature_229_residues MNLKQIQIAIYSLFLTNKFGFKLNKATTNADKKKLRLEYAVSLFSKLNIEIVVSGLDKVNPDGQYLLLSNHRSIIDPCVI EMALKDTNVFGLWVAKKELYNSFFFGKFVRNGGSILLDRGSNKMSQFFKDIKKSLSNNASIFIFPEGTRNVQDTDLTEFK KGTQLIAVKNKLQILPVYIRTNSNTALKTAIKNREKKLQIEVEFGDVIDYKDRTMDLEQAYRNMFDTQA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Drosophila melanogaster, GI281364648, Length=147, Percent_Identity=31.9727891156463, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582856, Length=147, Percent_Identity=31.9727891156463, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582854, Length=147, Percent_Identity=31.9727891156463, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 26245; Mature: 26245
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKQIQIAIYSLFLTNKFGFKLNKATTNADKKKLRLEYAVSLFSKLNIEIVVSGLDKVN CCHHHHHHHEEHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCC PDGQYLLLSNHRSIIDPCVIEMALKDTNVFGLWVAKKELYNSFFFGKFVRNGGSILLDRG CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEECC SNKMSQFFKDIKKSLSNNASIFIFPEGTRNVQDTDLTEFKKGTQLIAVKNKLQILPVYIR CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEEECCEEEEEEEEE TNSNTALKTAIKNREKKLQIEVEFGDVIDYKDRTMDLEQAYRNMFDTQA ECCCCHHHHHHCCCCEEEEEEEEECCEECCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MNLKQIQIAIYSLFLTNKFGFKLNKATTNADKKKLRLEYAVSLFSKLNIEIVVSGLDKVN CCHHHHHHHEEHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCC PDGQYLLLSNHRSIIDPCVIEMALKDTNVFGLWVAKKELYNSFFFGKFVRNGGSILLDRG CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEECC SNKMSQFFKDIKKSLSNNASIFIFPEGTRNVQDTDLTEFKKGTQLIAVKNKLQILPVYIR CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEEECCEEEEEEEEE TNSNTALKTAIKNREKKLQIEVEFGDVIDYKDRTMDLEQAYRNMFDTQA ECCCCHHHHHHCCCCEEEEEEEEECCEECCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]