Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945651
Identifier: 119945651
GI number: 119945651
Start: 2388743
End: 2390464
Strand: Reverse
Name: 119945651
Synonym: Ping_1964
Alternate gene names: NA
Gene position: 2390464-2388743 (Counterclockwise)
Preceding gene: 119945652
Following gene: 119945650
Centisome position: 52.43
GC content: 41.7
Gene sequence:
>1722_bases ATGCTTAAAAAATCTCTTCTGGTAGTCGCGCTTGCTTCTATTCTAACCGGTTGTGGAGGCTCATCTGATAGTACTGATAC AGGATCAACTACTTATACCGTTATTGATGGTTATTTAAGTGCCGCCGAAGTTTATGTTCTTTCACCCGATGGCAGCACAA AAACGCTCATTGGTGAGACGGATATTAATGGTAAAATACAGATCCCTACTGAATATGAAGGTTATACTGTGATAGCGAAG ATTATTGCAGGTAAAACGATTGACAATGATAGCCCTGGAATACCTGTTACAAAAAGTTATGAAATGCGCGGCACAGCAGA TTCTACCGTAGTGACCCCTTTTACAACGCTTGCTAATATTAACGTGATGACATTAACAGATCTTGCTCTTGAGCTCGAAC TCGAGGAAGCTGACGTAGGTGGAGATTATGTCAAGTCACCGGACGGTAAAGCACATTTAGTGGCGCGTACTCTGGCCGCG CGATTAGATGATGATAGCAGCAATGATCATGATGATGCTGATCATTTAAAAACCTTAGCAGGCAATTCGGTTACTTATAT CAGGGATAACCACGAACAGCATGGTGATGATCTGGACACAGTTGAACTGTATTATGATACTGAAGATAATCTTTCATCTG GAGTTCGTGTCGATAGTCATAGCGAATCCAATGATGACAGTAGTCATAGCGAATCTACTGATACTACTGAGTCAACAGAT ACAGGGTCAACAGACACAAGCTCAACTTATACTGGGTCAACAGATACTGAGTCAACAGATACAGGGTCAACTGACACAAG CTCAACTTATACAGGGTCAACTGACACAAGCTCAACTTATACAGGGTCAACTGACACAAGCTCAACTTATACAGGGTCAA CAGATACAAAGTCAACTTATACTGGTTCAACAGATACTGAGTCAACTGACACAGGGTCAGCAGATACAGAGTCAACTTAT ACTGGGTCAGCAGATACTGAGTCAACTGAGACAGAGTCAACTGATACTGGGTCAGCAGATACAGGGTCAACTTATACTGG GTCAACTGAGACAGGATCAACCACTTATACCGTTATTGATGGTTATTTAAGTGCCGCGGAAGTTTATGTTCTTTCACCCG ATGGCAGCACAGAAACGCTCATTGGTGAGACGAATACTAGTGGTCAAATACAGATTCCTGTTGAATATAACGGTTATACT GTGATAGCGAAGATCATTGCAGGTAAGACGATTGATAATGATAGCCCTGGAACCTTTGTTACAAAAAGTTATGAAATGCG CGGCACAGCAGATTCTACCGTAGTGACCCCTTTTACAACTATTGCTAATATTAATGTGATGACATTAACAGATCTTGCTC TTTATCTGGATCTCGACGAAGCTGACGTAGGCGGGGATTATGTCAATTCACTGGACGGTAAAGCACATTTAGTGGCGCGT ACTCTGGCCGCGCGATTAGATGATGATAGCAGCAATGATCATGATGATGCTGATCATTTAAAAACCTTAGCAGGTAATTC GGTTACTTATATCAGTGAAAACCACCATCAAGATGATCTGGACACAGTTGAACTGCATTATGATACTGAAGATAAGCTTT CCTCTGGAGTTCGCGTCTCTCACCATAGCGAATCCAATAATGACAGTAGTCATAATGAATCGAATGATGATAGTAGCCAC AGCGAATCCAATGATGATACTAACCATAGTGAATATGATTGA
Upstream 100 bases:
>100_bases TTTCTAGTTGATTCTCACTTTAGTTACTGATTAAATTATTAAGCTCTCATTTATATTAGTGCTTTTAACTTTTAACTATT AACCATTACAGGAATTCATC
Downstream 100 bases:
>100_bases TTAGCAGAGGAGAGATAGCAAGTTTAGAGATGCATAACGAATCTTAAATTTTTATCCTGTAAAAAAAACCACAAATTTAT TTGTGGTTTTTTTTTACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MLKKSLLVVALASILTGCGGSSDSTDTGSTTYTVIDGYLSAAEVYVLSPDGSTKTLIGETDINGKIQIPTEYEGYTVIAK IIAGKTIDNDSPGIPVTKSYEMRGTADSTVVTPFTTLANINVMTLTDLALELELEEADVGGDYVKSPDGKAHLVARTLAA RLDDDSSNDHDDADHLKTLAGNSVTYIRDNHEQHGDDLDTVELYYDTEDNLSSGVRVDSHSESNDDSSHSESTDTTESTD TGSTDTSSTYTGSTDTESTDTGSTDTSSTYTGSTDTSSTYTGSTDTSSTYTGSTDTKSTYTGSTDTESTDTGSADTESTY TGSADTESTETESTDTGSADTGSTYTGSTETGSTTYTVIDGYLSAAEVYVLSPDGSTETLIGETNTSGQIQIPVEYNGYT VIAKIIAGKTIDNDSPGTFVTKSYEMRGTADSTVVTPFTTIANINVMTLTDLALYLDLDEADVGGDYVNSLDGKAHLVAR TLAARLDDDSSNDHDDADHLKTLAGNSVTYISENHHQDDLDTVELHYDTEDKLSSGVRVSHHSESNNDSSHNESNDDSSH SESNDDTNHSEYD
Sequences:
>Translated_573_residues MLKKSLLVVALASILTGCGGSSDSTDTGSTTYTVIDGYLSAAEVYVLSPDGSTKTLIGETDINGKIQIPTEYEGYTVIAK IIAGKTIDNDSPGIPVTKSYEMRGTADSTVVTPFTTLANINVMTLTDLALELELEEADVGGDYVKSPDGKAHLVARTLAA RLDDDSSNDHDDADHLKTLAGNSVTYIRDNHEQHGDDLDTVELYYDTEDNLSSGVRVDSHSESNDDSSHSESTDTTESTD TGSTDTSSTYTGSTDTESTDTGSTDTSSTYTGSTDTSSTYTGSTDTSSTYTGSTDTKSTYTGSTDTESTDTGSADTESTY TGSADTESTETESTDTGSADTGSTYTGSTETGSTTYTVIDGYLSAAEVYVLSPDGSTETLIGETNTSGQIQIPVEYNGYT VIAKIIAGKTIDNDSPGTFVTKSYEMRGTADSTVVTPFTTIANINVMTLTDLALYLDLDEADVGGDYVNSLDGKAHLVAR TLAARLDDDSSNDHDDADHLKTLAGNSVTYISENHHQDDLDTVELHYDTEDKLSSGVRVSHHSESNNDSSHNESNDDSSH SESNDDTNHSEYD >Mature_573_residues MLKKSLLVVALASILTGCGGSSDSTDTGSTTYTVIDGYLSAAEVYVLSPDGSTKTLIGETDINGKIQIPTEYEGYTVIAK IIAGKTIDNDSPGIPVTKSYEMRGTADSTVVTPFTTLANINVMTLTDLALELELEEADVGGDYVKSPDGKAHLVARTLAA RLDDDSSNDHDDADHLKTLAGNSVTYIRDNHEQHGDDLDTVELYYDTEDNLSSGVRVDSHSESNDDSSHSESTDTTESTD TGSTDTSSTYTGSTDTESTDTGSTDTSSTYTGSTDTSSTYTGSTDTSSTYTGSTDTKSTYTGSTDTESTDTGSADTESTY TGSADTESTETESTDTGSADTGSTYTGSTETGSTTYTVIDGYLSAAEVYVLSPDGSTETLIGETNTSGQIQIPVEYNGYT VIAKIIAGKTIDNDSPGTFVTKSYEMRGTADSTVVTPFTTIANINVMTLTDLALYLDLDEADVGGDYVNSLDGKAHLVAR TLAARLDDDSSNDHDDADHLKTLAGNSVTYISENHHQDDLDTVELHYDTEDKLSSGVRVSHHSESNNDSSHNESNDDSSH SESNDDTNHSEYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60650; Mature: 60650
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKSLLVVALASILTGCGGSSDSTDTGSTTYTVIDGYLSAAEVYVLSPDGSTKTLIGET CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEC DINGKIQIPTEYEGYTVIAKIIAGKTIDNDSPGIPVTKSYEMRGTADSTVVTPFTTLANI CCCCEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCEEECEEECCCCCCEEEECCHHHHCC NVMTLTDLALELELEEADVGGDYVKSPDGKAHLVARTLAARLDDDSSNDHDDADHLKTLA EEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC GNSVTYIRDNHEQHGDDLDTVELYYDTEDNLSSGVRVDSHSESNDDSSHSESTDTTESTD CCEEEEEECCCHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC TGSTDTSSTYTGSTDTESTDTGSTDTSSTYTGSTDTSSTYTGSTDTSSTYTGSTDTKSTY CCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCCCEECCCCCCCCEE TGSTDTESTDTGSADTESTYTGSADTESTETESTDTGSADTGSTYTGSTETGSTTYTVID CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEE GYLSAAEVYVLSPDGSTETLIGETNTSGQIQIPVEYNGYTVIAKIIAGKTIDNDSPGTFV CCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEEHHCCCCCCCCCCCEE TKSYEMRGTADSTVVTPFTTIANINVMTLTDLALYLDLDEADVGGDYVNSLDGKAHLVAR EEEEEECCCCCCEEEECEEHHHEEEEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHH TLAARLDDDSSNDHDDADHLKTLAGNSVTYISENHHQDDLDTVELHYDTEDKLSSGVRVS HHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHCCEEEE HHSESNNDSSHNESNDDSSHSESNDDTNHSEYD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKKSLLVVALASILTGCGGSSDSTDTGSTTYTVIDGYLSAAEVYVLSPDGSTKTLIGET CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEC DINGKIQIPTEYEGYTVIAKIIAGKTIDNDSPGIPVTKSYEMRGTADSTVVTPFTTLANI CCCCEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCEEECEEECCCCCCEEEECCHHHHCC NVMTLTDLALELELEEADVGGDYVKSPDGKAHLVARTLAARLDDDSSNDHDDADHLKTLA EEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC GNSVTYIRDNHEQHGDDLDTVELYYDTEDNLSSGVRVDSHSESNDDSSHSESTDTTESTD CCEEEEEECCCHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC TGSTDTSSTYTGSTDTESTDTGSTDTSSTYTGSTDTSSTYTGSTDTSSTYTGSTDTKSTY CCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEECCCCCCCCEECCCCCCCCEE TGSTDTESTDTGSADTESTYTGSADTESTETESTDTGSADTGSTYTGSTETGSTTYTVID CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEE GYLSAAEVYVLSPDGSTETLIGETNTSGQIQIPVEYNGYTVIAKIIAGKTIDNDSPGTFV CCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEEHHCCCCCCCCCCCEE TKSYEMRGTADSTVVTPFTTIANINVMTLTDLALYLDLDEADVGGDYVNSLDGKAHLVAR EEEEEECCCCCCEEEECEEHHHEEEEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHH TLAARLDDDSSNDHDDADHLKTLAGNSVTYISENHHQDDLDTVELHYDTEDKLSSGVRVS HHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHCCEEEE HHSESNNDSSHNESNDDSSHSESNDDTNHSEYD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA