Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is yjjN [C]
Identifier: 119945643
GI number: 119945643
Start: 2377614
End: 2378696
Strand: Reverse
Name: yjjN [C]
Synonym: Ping_1955
Alternate gene names: 119945643
Gene position: 2378696-2377614 (Counterclockwise)
Preceding gene: 119945648
Following gene: 119945642
Centisome position: 52.17
GC content: 47.92
Gene sequence:
>1083_bases ATGTCCCCTAGTTCAATGAAAGCTTCAATGACAGCCATAGTCACCACAGGCAGTGGCGGTTATGACCAATTGGTCTGCAA ACAAGTTCCAATTCCAGATCTCTGCAATGGAGAAGTGCTGGTTAAAGTGTTGGCCGCCGGCGTTAACAATACTGAGATTA ATACCAGACTGGGATGGTATTCTTCTTCAGTGCACGGCTCTACCAACGACACCTCGAACTCAGAGAAAGATCAGCCAAAG GCCGACGGCGGCTGGAATAAGCAAACGGCTTTTCCATTTATTCAAGGCACAGATTGCTGTGGGGTGGTGGTGAATGTGGC AGACGATGTCGATACTGGTCTTATGGACAAACGGGTACTTATCCGGCCCTGTATTCGCGAACACGGTTTTGGCTCTTTGG ATAATATCTGGATGGGATCTGATTTTGATGGTGCTTTTGCTGAATATGTGAAAATTCGAGCAACTGAAGTGTTCCCAGTG GTCTGTAACTGGAGCGATGCAGAACTTGGTACTATTCCTTGTGCCTATGGTACATCCGAGAATATGCTCAACAGGGCCAA TTTGAGAGCCGGTGAAACGGTTTTGGTAGCGGGTGCATCAGGTGGAGTAGGCTCTGCTACTGTACAGCTTGCAAAGCGCA GGGGAGCCAAGGTTATCGCCATTGCGGGAGAGGAAAAGCATGACAAAGTAGCTCCGCTTGGCGCAGATATTCTGTTAGGC AGAAGCGCTAATCTGCTTGTGGAATTAGGGGAGCAATCTGTCGATGTTGTGGTTGATAATGTGGGCGGAAGTGGTTTTCC GACCATGCTCAAACTATTAAAACGAGGTGGGCGGTTTGTCTCATCCGGCGCGATTGCAGGGCCTATTGTTGAACTTGATA TGCGCGATATGTACCTGAAAGACATCACGCTAATAGGTACAACCGCTTGGGAGAAAACTGTTTTCCCTGATCTTGTGCGC TACATAGAGCAGGGCGAAATTCACCCCGTGTTAGCGAAGACCTTTCCGTTATCTTCGATTGCCGAAGCTCAAAAAGAGTT TCTTGAGAAAAAGCACGTCGGTAAATTTGTACTGATACCCTAA
Upstream 100 bases:
>100_bases AAATAAAATAATCGCAGAAAGCATATTGTCATCCGCTATTTTCAATAAAATATCTGTTATAACTAACTGAAACTCTGTAA TTATAGAAGGAACCCGAATA
Downstream 100 bases:
>100_bases GCAGGAAAATCGGTGGGGAAATGATTTAGCCTGCTAATCAGTGGTATTGAGACCCAGAGGTGGGTCATTTTTATGCTTTT TATGAGTACTATGGTTGAAG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Acryloyl-CoA reductase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSPSSMKASMTAIVTTGSGGYDQLVCKQVPIPDLCNGEVLVKVLAAGVNNTEINTRLGWYSSSVHGSTNDTSNSEKDQPK ADGGWNKQTAFPFIQGTDCCGVVVNVADDVDTGLMDKRVLIRPCIREHGFGSLDNIWMGSDFDGAFAEYVKIRATEVFPV VCNWSDAELGTIPCAYGTSENMLNRANLRAGETVLVAGASGGVGSATVQLAKRRGAKVIAIAGEEKHDKVAPLGADILLG RSANLLVELGEQSVDVVVDNVGGSGFPTMLKLLKRGGRFVSSGAIAGPIVELDMRDMYLKDITLIGTTAWEKTVFPDLVR YIEQGEIHPVLAKTFPLSSIAEAQKEFLEKKHVGKFVLIP
Sequences:
>Translated_360_residues MSPSSMKASMTAIVTTGSGGYDQLVCKQVPIPDLCNGEVLVKVLAAGVNNTEINTRLGWYSSSVHGSTNDTSNSEKDQPK ADGGWNKQTAFPFIQGTDCCGVVVNVADDVDTGLMDKRVLIRPCIREHGFGSLDNIWMGSDFDGAFAEYVKIRATEVFPV VCNWSDAELGTIPCAYGTSENMLNRANLRAGETVLVAGASGGVGSATVQLAKRRGAKVIAIAGEEKHDKVAPLGADILLG RSANLLVELGEQSVDVVVDNVGGSGFPTMLKLLKRGGRFVSSGAIAGPIVELDMRDMYLKDITLIGTTAWEKTVFPDLVR YIEQGEIHPVLAKTFPLSSIAEAQKEFLEKKHVGKFVLIP >Mature_359_residues SPSSMKASMTAIVTTGSGGYDQLVCKQVPIPDLCNGEVLVKVLAAGVNNTEINTRLGWYSSSVHGSTNDTSNSEKDQPKA DGGWNKQTAFPFIQGTDCCGVVVNVADDVDTGLMDKRVLIRPCIREHGFGSLDNIWMGSDFDGAFAEYVKIRATEVFPVV CNWSDAELGTIPCAYGTSENMLNRANLRAGETVLVAGASGGVGSATVQLAKRRGAKVIAIAGEEKHDKVAPLGADILLGR SANLLVELGEQSVDVVVDNVGGSGFPTMLKLLKRGGRFVSSGAIAGPIVELDMRDMYLKDITLIGTTAWEKTVFPDLVRY IEQGEIHPVLAKTFPLSSIAEAQKEFLEKKHVGKFVLIP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the acryloyl- CoA dependent NADPH oxidation and formation of propionyl-CoA [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=346, Percent_Identity=26.3005780346821, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI13236495, Length=346, Percent_Identity=26.3005780346821, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI194239676, Length=340, Percent_Identity=25.2941176470588, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI197927207, Length=193, Percent_Identity=29.5336787564767, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI47519420, Length=346, Percent_Identity=26.3005780346821, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI24308257, Length=382, Percent_Identity=23.5602094240838, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507255, Length=362, Percent_Identity=25.1381215469613, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=362, Percent_Identity=27.3480662983425, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323961, Length=375, Percent_Identity=24, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323729, Length=353, Percent_Identity=22.6628895184136, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324486, Length=355, Percent_Identity=22.2535211267606, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319621, Length=353, Percent_Identity=24.0793201133144, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.3.1.84 [H]
Molecular weight: Translated: 38436; Mature: 38305
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSSMKASMTAIVTTGSGGYDQLVCKQVPIPDLCNGEVLVKVLAAGVNNTEINTRLGWY CCCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECEE SSSVHGSTNDTSNSEKDQPKADGGWNKQTAFPFIQGTDCCGVVVNVADDVDTGLMDKRVL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHH IRPCIREHGFGSLDNIWMGSDFDGAFAEYVKIRATEVFPVVCNWSDAELGTIPCAYGTSE HHHHHHHCCCCCCCCEEECCCCCHHHHHHHEEEEEEEEEEEECCCCCCCCCEEECCCCCH NMLNRANLRAGETVLVAGASGGVGSATVQLAKRRGAKVIAIAGEEKHDKVAPLGADILLG HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEC RSANLLVELGEQSVDVVVDNVGGSGFPTMLKLLKRGGRFVSSGAIAGPIVELDMRDMYLK CCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECHHHHHHH DITLIGTTAWEKTVFPDLVRYIEQGEIHPVLAKTFPLSSIAEAQKEFLEKKHVGKFVLIP EEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure SPSSMKASMTAIVTTGSGGYDQLVCKQVPIPDLCNGEVLVKVLAAGVNNTEINTRLGWY CCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECEE SSSVHGSTNDTSNSEKDQPKADGGWNKQTAFPFIQGTDCCGVVVNVADDVDTGLMDKRVL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHH IRPCIREHGFGSLDNIWMGSDFDGAFAEYVKIRATEVFPVVCNWSDAELGTIPCAYGTSE HHHHHHHCCCCCCCCEEECCCCCHHHHHHHEEEEEEEEEEEECCCCCCCCCEEECCCCCH NMLNRANLRAGETVLVAGASGGVGSATVQLAKRRGAKVIAIAGEEKHDKVAPLGADILLG HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEC RSANLLVELGEQSVDVVVDNVGGSGFPTMLKLLKRGGRFVSSGAIAGPIVELDMRDMYLK CCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECHHHHHHH DITLIGTTAWEKTVFPDLVRYIEQGEIHPVLAKTFPLSSIAEAQKEFLEKKHVGKFVLIP EEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA