Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945635
Identifier: 119945635
GI number: 119945635
Start: 2368762
End: 2369052
Strand: Reverse
Name: 119945635
Synonym: Ping_1947
Alternate gene names: NA
Gene position: 2369052-2368762 (Counterclockwise)
Preceding gene: 119945638
Following gene: 119945634
Centisome position: 51.96
GC content: 34.02
Gene sequence:
>291_bases GTGACACTAAAAAATAAAATATCGTCCAGTTTTGTAGTATTGGTATTGGCTTTTTCTATTCCCGCTTTCGCTGATATGTT TGCACCAAGCCCACTTTGTTCAAAACCATCAAAGCCTTTCCAATTTAATTCTCAATGGGAGATTGATAGCTTTAATGACG ACGTGCAACGTTATAAGCATTGTATTAATAATTTTGTTGATAAACAAAATGAAGCAGTGGAAACACATCAACAGGCTGCT AACGATGCTATTAATAAGTGGAATAGGTTTGTAAATTACGAGCTTAATTAA
Upstream 100 bases:
>100_bases AGTCTGTTATCATATAATTATTATCAAGAAATAAGATTTTAAATATATATTCGTGATAATGCAGGCTAATACACTGTTAT AATTCACGATGGGGCCCAGA
Downstream 100 bases:
>100_bases ATTAAGTTATAACAAGCAATTGTACTGGACGCTTTAGTCTTAGCACAAGAGAGCAGGGCGTTGGTATTTTTAGCAGTAGT AAGTAGATCAATCACAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTLKNKISSSFVVLVLAFSIPAFADMFAPSPLCSKPSKPFQFNSQWEIDSFNDDVQRYKHCINNFVDKQNEAVETHQQAA NDAINKWNRFVNYELN
Sequences:
>Translated_96_residues MTLKNKISSSFVVLVLAFSIPAFADMFAPSPLCSKPSKPFQFNSQWEIDSFNDDVQRYKHCINNFVDKQNEAVETHQQAA NDAINKWNRFVNYELN >Mature_95_residues TLKNKISSSFVVLVLAFSIPAFADMFAPSPLCSKPSKPFQFNSQWEIDSFNDDVQRYKHCINNFVDKQNEAVETHQQAAN DAINKWNRFVNYELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11091; Mature: 10959
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKNKISSSFVVLVLAFSIPAFADMFAPSPLCSKPSKPFQFNSQWEIDSFNDDVQRYKH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CINNFVDKQNEAVETHQQAANDAINKWNRFVNYELN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLKNKISSSFVVLVLAFSIPAFADMFAPSPLCSKPSKPFQFNSQWEIDSFNDDVQRYKH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CINNFVDKQNEAVETHQQAANDAINKWNRFVNYELN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA