Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945634
Identifier: 119945634
GI number: 119945634
Start: 2368307
End: 2368639
Strand: Reverse
Name: 119945634
Synonym: Ping_1946
Alternate gene names: NA
Gene position: 2368639-2368307 (Counterclockwise)
Preceding gene: 119945635
Following gene: 119945631
Centisome position: 51.95
GC content: 39.64
Gene sequence:
>333_bases ATGAAGAAAGTTGTAACAGCCGCAGTATTGACAGGGATACTAACTCTAACAGGTTGTGCTTCATATAGCCCTTGGGATGT AATGCCATACCAAGAGGCAAACGCATGGAAAGGTATTGGTGTGCAAGCTTATGATGCAAGCACTCTACGTAGTAATGGTT TTACTCCAACGGATACCAAAGAATGGATTCAAGCAGGGATCAAATCGCCTCAAACAATTGTTGAGTGGAATAAAGCAGGA TTCAGCCCAAGAACTGCATCAAAATGGATCGCTAAAAATTTCACTTTAGAGAATGCGATTTCATTTAAAAAACAAGGACT AACAGTAGAATAA
Upstream 100 bases:
>100_bases TACTGGACGCTTTAGTCTTAGCACAAGAGAGCAGGGCGTTGGTATTTTTAGCAGTAGTAAGTAGATCAATCACAAAGATC ATTAAACAAAGGAGATGATA
Downstream 100 bases:
>100_bases ATAAAAATATAACAAATAAGGATAGGTATCGCACAGCTGACACCTTATCTGGTTGTTGAACAAGCTCGTGCCTACTTATT TATAGTAAATTGTGGGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKKVVTAAVLTGILTLTGCASYSPWDVMPYQEANAWKGIGVQAYDASTLRSNGFTPTDTKEWIQAGIKSPQTIVEWNKAG FSPRTASKWIAKNFTLENAISFKKQGLTVE
Sequences:
>Translated_110_residues MKKVVTAAVLTGILTLTGCASYSPWDVMPYQEANAWKGIGVQAYDASTLRSNGFTPTDTKEWIQAGIKSPQTIVEWNKAG FSPRTASKWIAKNFTLENAISFKKQGLTVE >Mature_110_residues MKKVVTAAVLTGILTLTGCASYSPWDVMPYQEANAWKGIGVQAYDASTLRSNGFTPTDTKEWIQAGIKSPQTIVEWNKAG FSPRTASKWIAKNFTLENAISFKKQGLTVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12059; Mature: 12059
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVTAAVLTGILTLTGCASYSPWDVMPYQEANAWKGIGVQAYDASTLRSNGFTPTDTK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCHH EWIQAGIKSPQTIVEWNKAGFSPRTASKWIAKNFTLENAISFKKQGLTVE HHHHHHCCCCHHEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKKVVTAAVLTGILTLTGCASYSPWDVMPYQEANAWKGIGVQAYDASTLRSNGFTPTDTK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCHH EWIQAGIKSPQTIVEWNKAGFSPRTASKWIAKNFTLENAISFKKQGLTVE HHHHHHCCCCHHEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA