Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is phnE [H]
Identifier: 119945470
GI number: 119945470
Start: 2149071
End: 2150561
Strand: Reverse
Name: phnE [H]
Synonym: Ping_1768
Alternate gene names: 119945470
Gene position: 2150561-2149071 (Counterclockwise)
Preceding gene: 119945471
Following gene: 119945465
Centisome position: 47.17
GC content: 41.31
Gene sequence:
>1491_bases ATGCCTAAAATCATCACCGTTAGTGGATTCTCTTTTGTAGGACACTGGCAAAAAATAACGCTATTGCTTTTACTGATGGT ATCAGTATGTTGGTTTTTTGCTGATACCGAAGTGATTGCGCTCGAACCTTGGATTGAACTTGGACGTATGGGACTGGGTT TTATTCATCCCGATTTTTTCGCGACAGAGTATTTACTTGAAGCTCTGTGGCAAACCATCAGTTTTGCTCTACTTGGGATA ACGCTCGGATTGCTATTGGGATTTCCATTAGCATTGTGGTATCAGCATCCTTTGATTGCGGCAATCTGTGCGTTTATTCG TGCTATCCATGAGATATTTTGGGCGCTAATATTTTTACAAATATTCGGTTTATCGGCCATTACGGGTATTTTAGCTATTG CCCTTCCTTATGCCGCCACGTTTGCCCGAATATTTTCAGATATTTTACAGCAAGCACCAAAACACACATTATTTTCTCTG CCAAAGGGCACAGATAAACTTTCGGCATTTATTTATGGCCGCTGGATGCATATGTATCCACAGATTGTCGATTATATTCG TTACCGTTTCGAGTGTGCGCTGCGCAGTAGTGCTGTGCTCGGTTTTATTGGTATGCCTACCTTAGGTTTTTATTTAGAAT CGGCGTTTCGCCAAGGGCATTATGAACAAGGTGGTGCATTATTAATCCTATTCGTGCTGTTAATTGGCACTATACGCTTT TGGGCTAAACCGATTTTTTTGTGGTTGTATTTACCACTCGCCGTCTATTTTTTACCGCCTATTCCGGCCATTGACGGTCA ACTTATTTGGCGCTTTATCAGTGTTGATATTTTACCACCTATGCTGCAGGGGCAACCCTTCTTAAGCTGGTTTAATCCTG ATATTTTGCCGAAGGTCTTTGACTGGGCTTATAACTTAATCAGCCAGCAGGTTTTTCCCGGAATGATTGCAACCTTAGTC TTGGCTTTTTGTGCATTAGGATTAACCTATTTGCTGACCCTGGTTTTATTACCTTTTAATACCCGGCTGATGATGCCAAA AGTTGTCATATTAATCATGCGGGCCGTGAATTTAATATTACGTTCACTGCCAGAATATTTATTGGCCTTTGTGCTTATGA TGCTATTAGGGCCTTCCATGTTACCCGCTATTATCGCTTTAGCATTGCACAATAGTGGCCTTATGGTCTTTTTAATGGCG CGTCAGGCTGATAGCGTGACAGTGCCACTGACTTATAAGCCCAGGATTGATCAATACAGTTATCTGGTTCTTCCTGCCCT ATACCCCCATTTTATGGGCCTATTGTTTTATCGTTTTGAAGTAATTATCCGTGAAACAGCTATTTTGGGCATGATTGGGG TAATGACGTTAGGATTTTATGTTGACAGTAATTTTGCTGAAATTCGCTTTAGCGCAGCCTTATTATTATTGGTTTTCACT GCAGGGCTCAATGTCATCGTTGATTATCTCGCTCGGCGATTATTGCATTAA
Upstream 100 bases:
>100_bases GGCAGATACTGTCAAAAATGCAGTGATATGAAGATATTAATACTAAAAAACAACTTTTTTATAACCCACTTTTCCCTATT CAGTCACCACCCTTTCTATT
Downstream 100 bases:
>100_bases CCGCGTGATTATTTACAAGCTTGCTAGTGTTAATTTTCCTGCGCAATGCAAGATCTCATCTTTAATACATTGGTTATTAG TGCTGTTTTTGCTGCCTTTT
Product: ABC transporter complex for phosphonate inner membrane binding subunit
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MPKIITVSGFSFVGHWQKITLLLLLMVSVCWFFADTEVIALEPWIELGRMGLGFIHPDFFATEYLLEALWQTISFALLGI TLGLLLGFPLALWYQHPLIAAICAFIRAIHEIFWALIFLQIFGLSAITGILAIALPYAATFARIFSDILQQAPKHTLFSL PKGTDKLSAFIYGRWMHMYPQIVDYIRYRFECALRSSAVLGFIGMPTLGFYLESAFRQGHYEQGGALLILFVLLIGTIRF WAKPIFLWLYLPLAVYFLPPIPAIDGQLIWRFISVDILPPMLQGQPFLSWFNPDILPKVFDWAYNLISQQVFPGMIATLV LAFCALGLTYLLTLVLLPFNTRLMMPKVVILIMRAVNLILRSLPEYLLAFVLMMLLGPSMLPAIIALALHNSGLMVFLMA RQADSVTVPLTYKPRIDQYSYLVLPALYPHFMGLLFYRFEVIIRETAILGMIGVMTLGFYVDSNFAEIRFSAALLLLVFT AGLNVIVDYLARRLLH
Sequences:
>Translated_496_residues MPKIITVSGFSFVGHWQKITLLLLLMVSVCWFFADTEVIALEPWIELGRMGLGFIHPDFFATEYLLEALWQTISFALLGI TLGLLLGFPLALWYQHPLIAAICAFIRAIHEIFWALIFLQIFGLSAITGILAIALPYAATFARIFSDILQQAPKHTLFSL PKGTDKLSAFIYGRWMHMYPQIVDYIRYRFECALRSSAVLGFIGMPTLGFYLESAFRQGHYEQGGALLILFVLLIGTIRF WAKPIFLWLYLPLAVYFLPPIPAIDGQLIWRFISVDILPPMLQGQPFLSWFNPDILPKVFDWAYNLISQQVFPGMIATLV LAFCALGLTYLLTLVLLPFNTRLMMPKVVILIMRAVNLILRSLPEYLLAFVLMMLLGPSMLPAIIALALHNSGLMVFLMA RQADSVTVPLTYKPRIDQYSYLVLPALYPHFMGLLFYRFEVIIRETAILGMIGVMTLGFYVDSNFAEIRFSAALLLLVFT AGLNVIVDYLARRLLH >Mature_495_residues PKIITVSGFSFVGHWQKITLLLLLMVSVCWFFADTEVIALEPWIELGRMGLGFIHPDFFATEYLLEALWQTISFALLGIT LGLLLGFPLALWYQHPLIAAICAFIRAIHEIFWALIFLQIFGLSAITGILAIALPYAATFARIFSDILQQAPKHTLFSLP KGTDKLSAFIYGRWMHMYPQIVDYIRYRFECALRSSAVLGFIGMPTLGFYLESAFRQGHYEQGGALLILFVLLIGTIRFW AKPIFLWLYLPLAVYFLPPIPAIDGQLIWRFISVDILPPMLQGQPFLSWFNPDILPKVFDWAYNLISQQVFPGMIATLVL AFCALGLTYLLTLVLLPFNTRLMMPKVVILIMRAVNLILRSLPEYLLAFVLMMLLGPSMLPAIIALALHNSGLMVFLMAR QADSVTVPLTYKPRIDQYSYLVLPALYPHFMGLLFYRFEVIIRETAILGMIGVMTLGFYVDSNFAEIRFSAALLLLVFTA GLNVIVDYLARRLLH
Specific function: Part of the ABC transporter complex phnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56275; Mature: 56144
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIITVSGFSFVGHWQKITLLLLLMVSVCWFFADTEVIALEPWIELGRMGLGFIHPDFF CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCHHH ATEYLLEALWQTISFALLGITLGLLLGFPLALWYQHPLIAAICAFIRAIHEIFWALIFLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IFGLSAITGILAIALPYAATFARIFSDILQQAPKHTLFSLPKGTDKLSAFIYGRWMHMYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH QIVDYIRYRFECALRSSAVLGFIGMPTLGFYLESAFRQGHYEQGGALLILFVLLIGTIRF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH WAKPIFLWLYLPLAVYFLPPIPAIDGQLIWRFISVDILPPMLQGQPFLSWFNPDILPKVF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHH DWAYNLISQQVFPGMIATLVLAFCALGLTYLLTLVLLPFNTRLMMPKVVILIMRAVNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RSLPEYLLAFVLMMLLGPSMLPAIIALALHNSGLMVFLMARQADSVTVPLTYKPRIDQYS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCH YLVLPALYPHFMGLLFYRFEVIIRETAILGMIGVMTLGFYVDSNFAEIRFSAALLLLVFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGLNVIVDYLARRLLH HHHHHHHHHHHHHHCC >Mature Secondary Structure PKIITVSGFSFVGHWQKITLLLLLMVSVCWFFADTEVIALEPWIELGRMGLGFIHPDFF CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCHHH ATEYLLEALWQTISFALLGITLGLLLGFPLALWYQHPLIAAICAFIRAIHEIFWALIFLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IFGLSAITGILAIALPYAATFARIFSDILQQAPKHTLFSLPKGTDKLSAFIYGRWMHMYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH QIVDYIRYRFECALRSSAVLGFIGMPTLGFYLESAFRQGHYEQGGALLILFVLLIGTIRF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH WAKPIFLWLYLPLAVYFLPPIPAIDGQLIWRFISVDILPPMLQGQPFLSWFNPDILPKVF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHH DWAYNLISQQVFPGMIATLVLAFCALGLTYLLTLVLLPFNTRLMMPKVVILIMRAVNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RSLPEYLLAFVLMMLLGPSMLPAIIALALHNSGLMVFLMARQADSVTVPLTYKPRIDQYS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCH YLVLPALYPHFMGLLFYRFEVIIRETAILGMIGVMTLGFYVDSNFAEIRFSAALLLLVFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGLNVIVDYLARRLLH HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA