Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is ampG4 [H]
Identifier: 119945379
GI number: 119945379
Start: 2024800
End: 2026155
Strand: Reverse
Name: ampG4 [H]
Synonym: Ping_1667
Alternate gene names: 119945379
Gene position: 2026155-2024800 (Counterclockwise)
Preceding gene: 119945380
Following gene: 119945372
Centisome position: 44.44
GC content: 42.55
Gene sequence:
>1356_bases ATGAGCACAACGCTATCTTGGAAGGCAACCTTCCGTAGTTATTTAGATAAGCGCTTATTATGGGTATTTATGCTTGCCTG TTCAAGCGGTTTTCCCTGGGTTCTTATTGGCTCTAATATGTCCGGTTGGTTAAAAGATGCCGGGTTAACACGTGCCGCAA TCGGTTATTTTGGTTCAGTTTTTACTGTTTACGCCTTTAATTTTCTTTGGGCACCGTTGATCGATCGCGTAAAAATACCC ATCCTTTATCCCATTCTGGGGCAACGCCGCAGCTGGATATTCCTTTGCCAGTCATTTATTTTGGTTTTGACACTGTTGAT CGCAGGGACGCATCCTGCAACTAATCTGATGCTGACCTCAATGCTTGCGTTAGGTATTGCTATCTTTTCTGCCACGCAGG ATATTGCTATTGACGCCTACCGAATAGATACTTTTCCAAGACAACAAACCAGTAAATTACCCCAAGCTGCTGCGATGGCA GTGATCGGTTGGTGGACAGGTTATTCCCTGCCAGGCTACTTCGCTTTTATGAATGCTGACGGTATGGGTTGGAATGGTGT TTATTATGCAATGGCGGTTGTTGTTGCAATATTAATGTTGTTTACCCTGCTTGTTGGGGAGCCAATAACCGAACGAGAAG CCTTACAGCAGGAAGCCGAGGGTAAATATAACAAAGTGATGAAGTCTCACGCGGCCACCTGGTTTAGTGTCACTGTGATT GAGCCTTTTTGGGATTTCTTTAAACGTAATGGTCTTAAAGTGGCACTCACTATTTTATTATTCGTTTTCTTATTTAAAAT TGGTGAAGCTTTCCTTGGCCGTATGTCTATTGTCTTTTATAAAGAGATAGGCTTTAGCAATGAGCAAATAGGTCATTATT CAAAACTTATTGGCTGGGGGGCAACTATCTTCTTCACCTTGCTGGGCAGTGTATTTAACGTTAAGTTTGGTATTGTACGT GGTTTAATGATTGGTGGCACGGCAATGGCAGCCAGCAACTTGATGTTTGCATGGATAGCAAATGTGGGCCCGAATGAGCT TCTTTTCTTAGCCACCATCCTAGTGGATAACTTTACAACCGCATTTTCAACGGTTGCTTTTGTTTCATTTTTAACCCTGT TAACCGGCACCGCATTTTCTGCCACCCAATATGCCCTATTGGCTTCATTAGGTAATCTGGGACGTACTACGCTCGCGTCA TTTAGCGGTCAATTGATAGATGTTCTCAATGACTGGTCAACGTTTTTTATTATCACCGCCTTAATGGTTATTCCGAGTTT AATTATGCTCTATTCACTACGTCACTTCTTTGACCATGTTTCTGATCAACACAGGAGTAAAAAGCGCAAAGAATGA
Upstream 100 bases:
>100_bases GTTCATTCTCTAACGGTCTGATGGTGTAAAACCCATTCAAAAATTATAACATTATGCAGATAGTGCTTATCTGTATGGCT TTAATAAAAAGGAAAACTTA
Downstream 100 bases:
>100_bases CAAATTGAGGGAAATTAAAATGCGGTCTTATGCGGACCGAAAGCCTGAGATAGGCGTGATTGAACAGGTTATTTTTAGAA GGTTGTCAGAAGCCGTTTAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSTTLSWKATFRSYLDKRLLWVFMLACSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFTVYAFNFLWAPLIDRVKIP ILYPILGQRRSWIFLCQSFILVLTLLIAGTHPATNLMLTSMLALGIAIFSATQDIAIDAYRIDTFPRQQTSKLPQAAAMA VIGWWTGYSLPGYFAFMNADGMGWNGVYYAMAVVVAILMLFTLLVGEPITEREALQQEAEGKYNKVMKSHAATWFSVTVI EPFWDFFKRNGLKVALTILLFVFLFKIGEAFLGRMSIVFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSVFNVKFGIVR GLMIGGTAMAASNLMFAWIANVGPNELLFLATILVDNFTTAFSTVAFVSFLTLLTGTAFSATQYALLASLGNLGRTTLAS FSGQLIDVLNDWSTFFIITALMVIPSLIMLYSLRHFFDHVSDQHRSKKRKE
Sequences:
>Translated_451_residues MSTTLSWKATFRSYLDKRLLWVFMLACSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFTVYAFNFLWAPLIDRVKIP ILYPILGQRRSWIFLCQSFILVLTLLIAGTHPATNLMLTSMLALGIAIFSATQDIAIDAYRIDTFPRQQTSKLPQAAAMA VIGWWTGYSLPGYFAFMNADGMGWNGVYYAMAVVVAILMLFTLLVGEPITEREALQQEAEGKYNKVMKSHAATWFSVTVI EPFWDFFKRNGLKVALTILLFVFLFKIGEAFLGRMSIVFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSVFNVKFGIVR GLMIGGTAMAASNLMFAWIANVGPNELLFLATILVDNFTTAFSTVAFVSFLTLLTGTAFSATQYALLASLGNLGRTTLAS FSGQLIDVLNDWSTFFIITALMVIPSLIMLYSLRHFFDHVSDQHRSKKRKE >Mature_450_residues STTLSWKATFRSYLDKRLLWVFMLACSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFTVYAFNFLWAPLIDRVKIPI LYPILGQRRSWIFLCQSFILVLTLLIAGTHPATNLMLTSMLALGIAIFSATQDIAIDAYRIDTFPRQQTSKLPQAAAMAV IGWWTGYSLPGYFAFMNADGMGWNGVYYAMAVVVAILMLFTLLVGEPITEREALQQEAEGKYNKVMKSHAATWFSVTVIE PFWDFFKRNGLKVALTILLFVFLFKIGEAFLGRMSIVFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSVFNVKFGIVRG LMIGGTAMAASNLMFAWIANVGPNELLFLATILVDNFTTAFSTVAFVSFLTLLTGTAFSATQYALLASLGNLGRTTLASF SGQLIDVLNDWSTFFIITALMVIPSLIMLYSLRHFFDHVSDQHRSKKRKE
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=445, Percent_Identity=30.561797752809, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50329; Mature: 50198
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLSWKATFRSYLDKRLLWVFMLACSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHH FTVYAFNFLWAPLIDRVKIPILYPILGQRRSWIFLCQSFILVLTLLIAGTHPATNLMLTS HHHHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MLALGIAIFSATQDIAIDAYRIDTFPRQQTSKLPQAAAMAVIGWWTGYSLPGYFAFMNAD HHHHHHHHHHCCHHHEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCC GMGWNGVYYAMAVVVAILMLFTLLVGEPITEREALQQEAEGKYNKVMKSHAATWFSVTVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCHHEEEEEH EPFWDFFKRNGLKVALTILLFVFLFKIGEAFLGRMSIVFYKEIGFSNEQIGHYSKLIGWG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ATIFFTLLGSVFNVKFGIVRGLMIGGTAMAASNLMFAWIANVGPNELLFLATILVDNFTT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AFSTVAFVSFLTLLTGTAFSATQYALLASLGNLGRTTLASFSGQLIDVLNDWSTFFIITA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH LMVIPSLIMLYSLRHFFDHVSDQHRSKKRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTLSWKATFRSYLDKRLLWVFMLACSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHH FTVYAFNFLWAPLIDRVKIPILYPILGQRRSWIFLCQSFILVLTLLIAGTHPATNLMLTS HHHHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MLALGIAIFSATQDIAIDAYRIDTFPRQQTSKLPQAAAMAVIGWWTGYSLPGYFAFMNAD HHHHHHHHHHCCHHHEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCC GMGWNGVYYAMAVVVAILMLFTLLVGEPITEREALQQEAEGKYNKVMKSHAATWFSVTVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCHHEEEEEH EPFWDFFKRNGLKVALTILLFVFLFKIGEAFLGRMSIVFYKEIGFSNEQIGHYSKLIGWG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ATIFFTLLGSVFNVKFGIVRGLMIGGTAMAASNLMFAWIANVGPNELLFLATILVDNFTT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AFSTVAFVSFLTLLTGTAFSATQYALLASLGNLGRTTLASFSGQLIDVLNDWSTFFIITA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH LMVIPSLIMLYSLRHFFDHVSDQHRSKKRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]