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The map label for this gene is dsbB

Identifier: 119945372

GI number: 119945372

Start: 2016409

End: 2016966

Strand: Reverse

Name: dsbB

Synonym: Ping_1660

Alternate gene names: 119945372

Gene position: 2016966-2016409 (Counterclockwise)

Preceding gene: 119945379

Following gene: 119945370

Centisome position: 44.24

GC content: 37.1

Gene sequence:

>558_bases
ATGTTACTCTTTTTTGTGATATTAGGAATCTTTGTGTTAACAATTTTAAAAGCGATTTCCAAACAGCGTTGGTCTTGGTT
ACTATTGGCAGCAAGCGCGCTATCCCTTGAATTATCTGCTTTATATTTTCAGCACGTTATGCAACTTGAACCCTGTGTTA
TGTGTGTTTATGAACGCCTTGCCATGCTTGGAATTTTATTGGCGGGTTTAATAGGCGCCAGTTCGCCAAATAATGTTTTT
ATTCGTTTGAGCGCTTTTTTATTATGGGGGATAAGTGCCGTTTGGGGAATTTTATTAGCAATAAAACATACGGATTATCA
ACTGCACCCTTCTCCCTTTTTCACCTGTGATTTTTTTCCTAATTTCCCGGCATGGGCACCTTTACATGAATGGCTGCCAT
GGTTATTTAATCCAACGGGTGACTGCTCCGATATTGTTTGGCAATTTTTAGGTTATTCTATGCCGCAATGGTTAATTGTT
AGTTTTTCACTCTATACATTGTTATTTATTATTTTTGCCATCAGCGCTGTGCTAAAAACTAAAAAACAATTATTCTAG

Upstream 100 bases:

>100_bases
AAAAGATAAAAACGAGACCACATACCACGAATAAAGAGCCTAAAATCAGCAATGACGCAGTTGAATCTCTTTCCATTTAG
CACTTCTAAATGCTAAAGTT

Downstream 100 bases:

>100_bases
CGTTGGGTTATAAATTCTAAAATCAGCTCACAGTTTGCCCTGTTATATTTTCTGCTGGAGAAAACGATTAGCGACTTCGA
CTTACCGTTTTCTATACTGT

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLLFFVILGIFVLTILKAISKQRWSWLLLAASALSLELSALYFQHVMQLEPCVMCVYERLAMLGILLAGLIGASSPNNVF
IRLSAFLLWGISAVWGILLAIKHTDYQLHPSPFFTCDFFPNFPAWAPLHEWLPWLFNPTGDCSDIVWQFLGYSMPQWLIV
SFSLYTLLFIIFAISAVLKTKKQLF

Sequences:

>Translated_185_residues
MLLFFVILGIFVLTILKAISKQRWSWLLLAASALSLELSALYFQHVMQLEPCVMCVYERLAMLGILLAGLIGASSPNNVF
IRLSAFLLWGISAVWGILLAIKHTDYQLHPSPFFTCDFFPNFPAWAPLHEWLPWLFNPTGDCSDIVWQFLGYSMPQWLIV
SFSLYTLLFIIFAISAVLKTKKQLF
>Mature_185_residues
MLLFFVILGIFVLTILKAISKQRWSWLLLAASALSLELSALYFQHVMQLEPCVMCVYERLAMLGILLAGLIGASSPNNVF
IRLSAFLLWGISAVWGILLAIKHTDYQLHPSPFFTCDFFPNFPAWAPLHEWLPWLFNPTGDCSDIVWQFLGYSMPQWLIV
SFSLYTLLFIIFAISAVLKTKKQLF

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family

Homologues:

Organism=Escherichia coli, GI1787433, Length=172, Percent_Identity=48.2558139534884, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DSBB_PSYIN (A1SVD8)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_943052.1
- ProteinModelPortal:   A1SVD8
- SMR:   A1SVD8
- STRING:   A1SVD8
- GeneID:   4626909
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_1660
- eggNOG:   COG1495
- HOGENOM:   HBG637909
- OMA:   ALYFQHV
- PhylomeDB:   A1SVD8
- ProtClustDB:   PRK01749
- BioCyc:   PING357804:PING_1660-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00286
- InterPro:   IPR003752
- InterPro:   IPR022920

Pfam domain/function: PF02600 DsbB

EC number: NA

Molecular weight: Translated: 21140; Mature: 21140

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x175b9f34)-; HASH(0x1490eec0)-; HASH(0x148e6ea8)-; HASH(0x15ad3898)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFFVILGIFVLTILKAISKQRWSWLLLAASALSLELSALYFQHVMQLEPCVMCVYERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLGILLAGLIGASSPNNVFIRLSAFLLWGISAVWGILLAIKHTDYQLHPSPFFTCDFFP
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCC
NFPAWAPLHEWLPWLFNPTGDCSDIVWQFLGYSMPQWLIVSFSLYTLLFIIFAISAVLKT
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKQLF
HHHCH
>Mature Secondary Structure
MLLFFVILGIFVLTILKAISKQRWSWLLLAASALSLELSALYFQHVMQLEPCVMCVYERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLGILLAGLIGASSPNNVFIRLSAFLLWGISAVWGILLAIKHTDYQLHPSPFFTCDFFP
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCC
NFPAWAPLHEWLPWLFNPTGDCSDIVWQFLGYSMPQWLIVSFSLYTLLFIIFAISAVLKT
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKQLF
HHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA