Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945313
Identifier: 119945313
GI number: 119945313
Start: 1952992
End: 1953447
Strand: Reverse
Name: 119945313
Synonym: Ping_1596
Alternate gene names: NA
Gene position: 1953447-1952992 (Counterclockwise)
Preceding gene: 119945314
Following gene: 119945312
Centisome position: 42.84
GC content: 37.5
Gene sequence:
>456_bases ATGATCAGTTGGCATAGTCGGGTGTTTGTCTATGTGTTCGATTTACATGTTGCTGACTTTAGCTTAGACAATAAATACAT CGCGGCATTCATCAGTAAATTACGTTTCCATTTTAAACAACATTATAAAATCAAACGATTAGGTTATGCATGGTGCCGGG AACAGAACACGTCGCCAAGACAGCATTATCACATGGCAATAATTGTAGATGGTTCAAAAATACAAAATCCAATAAGGCTA TTTCATAAAATAAAATTAATGTGGGATGAAGTCACGCTAGGTGGTCACTTACACGGGCTGGAAAATTGTTACTACAACAT TAAAAGAGATACGGAAATAAACAAAGCGGAAGCGATTGAGCGATTATCTTATCAAGCCAAGGTATGGACAAAGGATAAAA ACACTGCACGGGCAAATGATTATGGCACAAGCCGAATTAGGCCTAAACCAACATAA
Upstream 100 bases:
>100_bases TGTTTATAGGACTAAAGGAAAAATATATAAAGTTAACTGTGACAGGGGTAAACCTATATTTACCCACCAAATGGGAAAAA TAATTGAACAGGTGGAAAAT
Downstream 100 bases:
>100_bases CCAAAATATTACGGTGAGCATATTACTCATCGATATTGGTTTGTAACCAAACAGCAGCATTTAAATTATTACAACTGAGT TCATCTATATGCTTGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MISWHSRVFVYVFDLHVADFSLDNKYIAAFISKLRFHFKQHYKIKRLGYAWCREQNTSPRQHYHMAIIVDGSKIQNPIRL FHKIKLMWDEVTLGGHLHGLENCYYNIKRDTEINKAEAIERLSYQAKVWTKDKNTARANDYGTSRIRPKPT
Sequences:
>Translated_151_residues MISWHSRVFVYVFDLHVADFSLDNKYIAAFISKLRFHFKQHYKIKRLGYAWCREQNTSPRQHYHMAIIVDGSKIQNPIRL FHKIKLMWDEVTLGGHLHGLENCYYNIKRDTEINKAEAIERLSYQAKVWTKDKNTARANDYGTSRIRPKPT >Mature_151_residues MISWHSRVFVYVFDLHVADFSLDNKYIAAFISKLRFHFKQHYKIKRLGYAWCREQNTSPRQHYHMAIIVDGSKIQNPIRL FHKIKLMWDEVTLGGHLHGLENCYYNIKRDTEINKAEAIERLSYQAKVWTKDKNTARANDYGTSRIRPKPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18000; Mature: 18000
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISWHSRVFVYVFDLHVADFSLDNKYIAAFISKLRFHFKQHYKIKRLGYAWCREQNTSPR CCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC QHYHMAIIVDGSKIQNPIRLFHKIKLMWDEVTLGGHLHGLENCYYNIKRDTEINKAEAIE CEEEEEEEEECHHCCHHHHHHHHHHHHHEEEECCCCCCCCCHHEEECCCCCCCCHHHHHH RLSYQAKVWTKDKNTARANDYGTSRIRPKPT HHHHHEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISWHSRVFVYVFDLHVADFSLDNKYIAAFISKLRFHFKQHYKIKRLGYAWCREQNTSPR CCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC QHYHMAIIVDGSKIQNPIRLFHKIKLMWDEVTLGGHLHGLENCYYNIKRDTEINKAEAIE CEEEEEEEEECHHCCHHHHHHHHHHHHHEEEECCCCCCCCCHHEEECCCCCCCCHHHHHH RLSYQAKVWTKDKNTARANDYGTSRIRPKPT HHHHHEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA