Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945314
Identifier: 119945314
GI number: 119945314
Start: 1953763
End: 1953936
Strand: Reverse
Name: 119945314
Synonym: Ping_1597
Alternate gene names: NA
Gene position: 1953936-1953763 (Counterclockwise)
Preceding gene: 119945315
Following gene: 119945313
Centisome position: 42.85
GC content: 39.66
Gene sequence:
>174_bases ATGAAATTATTAACTACAGATGAAGTAACAAAAATTGTAGGCCGTTCTCGTGGAACACTATTCCGTTGGTGGAAAAAGGG CATTTTCCCTGAGCCCTTACTTTATAACGGAAGGACATTAGGTTGGAACGAGGAAGCCGTCCAACAATGGCTTAATAAAA AAGAACAGGGTTAA
Upstream 100 bases:
>100_bases CAGTCGGCTGGGTAGAAATCGAAATTTTGGATTGGATTAATGAACGCATTGAAGAACGCGATCAACAGATTGAAGCGAAA AAAAATAGTGAGAATTGCTG
Downstream 100 bases:
>100_bases TGCATGAGAAACAATTTGATACTGAATGACACAAAATGAAACAGTATTGAACAGTTTGAAGCATTTGTACCCTCTTCTGT TATTAATTAATTTTCCGCTT
Product: phage transcriptional regulator, AlpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MKLLTTDEVTKIVGRSRGTLFRWWKKGIFPEPLLYNGRTLGWNEEAVQQWLNKKEQG
Sequences:
>Translated_57_residues MKLLTTDEVTKIVGRSRGTLFRWWKKGIFPEPLLYNGRTLGWNEEAVQQWLNKKEQG >Mature_57_residues MKLLTTDEVTKIVGRSRGTLFRWWKKGIFPEPLLYNGRTLGWNEEAVQQWLNKKEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6749; Mature: 6749
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLTTDEVTKIVGRSRGTLFRWWKKGIFPEPLLYNGRTLGWNEEAVQQWLNKKEQG CCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKLLTTDEVTKIVGRSRGTLFRWWKKGIFPEPLLYNGRTLGWNEEAVQQWLNKKEQG CCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA