Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945312
Identifier: 119945312
GI number: 119945312
Start: 1951998
End: 1952849
Strand: Reverse
Name: 119945312
Synonym: Ping_1595
Alternate gene names: NA
Gene position: 1952849-1951998 (Counterclockwise)
Preceding gene: 119945313
Following gene: 119945311
Centisome position: 42.83
GC content: 41.78
Gene sequence:
>852_bases ATGTCAATAATTAAAGAAGAAATTAACTCCTGCAGCCACAATTTAATCGGTTACAAGACAGAAAGGTTAACTGTTCTTGA GTATGCTGGATGTGAGGTTGTAACGAACAAAAAAACAGGTAAGAAAAGCCGGCGACATCAATGGAAGTGTGTTTGTACAT GCGGTCATACAACAATCAAATCTACTTCAAGTTTGGTTTACCATAAAGTTAAGTCGTGCGGGTGCCAAAAATCAGAAGTC ACAGCAGCGAGAAATAAAACGCATGGCATGGTGGGCACGCCTGAATATCAGTCATGGCGAGGGATGAAAGAAAGGTGCTC AAATCCTAAGGGTATCCATTGGAACATATATGGTGGCAAAGGTATTAAAATTTGTGATAGATGGGTTGGTGATTTCCTGG CGTTTTATGAAGATATGGGCCAAAGGCCTGAAGGAATGTCACTGGATAGAATAGATTCCAATGGCAATTACTGTCCTGAA AATTGTCGCTGGGCAGATGCAAATACTCAAGCATTTAACACTTGCAGAACTATCCAAATCACCTTCGAAGGTGAAACCTT GTCATTATATCGAATGGCTGAAAAATACGGGCAAGGAGAAGCCACCGTTAGGTATCGACTGAACCAAGGTTGGAGCATTA AAGAGGCATTACTACTACCAGTGGGAGATCAACGGATTTATAACAAACACTCCAAGCGCCTTGAGTATGATGGACAATTC CTGACCGTAAAAGAACATGCGGAGAGGTATGGGCTTAATATTGTAACTGTTAGGACTAGGATTGGTAGAGGATATAGCCT TGAGAGAGTGTTCGCTCCAGCCATGAAACGCAAGAAAAAAACACTCAGCTGA
Upstream 100 bases:
>100_bases GTAACCAAACAGCAGCATTTAAATTATTACAACTGAGTTCATCTATATGCTTGATAAATTAACATTATTTTATAATTAAC AATCATAAAGGAATATGTCT
Downstream 100 bases:
>100_bases CTGGTATCAACAAACACTCGTTAAATGACATCATTAATCACGCACTGAAATGAGTATCATTAAACGGTATCAGGCTTTTT TGATGCCAACAATCATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSIIKEEINSCSHNLIGYKTERLTVLEYAGCEVVTNKKTGKKSRRHQWKCVCTCGHTTIKSTSSLVYHKVKSCGCQKSEV TAARNKTHGMVGTPEYQSWRGMKERCSNPKGIHWNIYGGKGIKICDRWVGDFLAFYEDMGQRPEGMSLDRIDSNGNYCPE NCRWADANTQAFNTCRTIQITFEGETLSLYRMAEKYGQGEATVRYRLNQGWSIKEALLLPVGDQRIYNKHSKRLEYDGQF LTVKEHAERYGLNIVTVRTRIGRGYSLERVFAPAMKRKKKTLS
Sequences:
>Translated_283_residues MSIIKEEINSCSHNLIGYKTERLTVLEYAGCEVVTNKKTGKKSRRHQWKCVCTCGHTTIKSTSSLVYHKVKSCGCQKSEV TAARNKTHGMVGTPEYQSWRGMKERCSNPKGIHWNIYGGKGIKICDRWVGDFLAFYEDMGQRPEGMSLDRIDSNGNYCPE NCRWADANTQAFNTCRTIQITFEGETLSLYRMAEKYGQGEATVRYRLNQGWSIKEALLLPVGDQRIYNKHSKRLEYDGQF LTVKEHAERYGLNIVTVRTRIGRGYSLERVFAPAMKRKKKTLS >Mature_282_residues SIIKEEINSCSHNLIGYKTERLTVLEYAGCEVVTNKKTGKKSRRHQWKCVCTCGHTTIKSTSSLVYHKVKSCGCQKSEVT AARNKTHGMVGTPEYQSWRGMKERCSNPKGIHWNIYGGKGIKICDRWVGDFLAFYEDMGQRPEGMSLDRIDSNGNYCPEN CRWADANTQAFNTCRTIQITFEGETLSLYRMAEKYGQGEATVRYRLNQGWSIKEALLLPVGDQRIYNKHSKRLEYDGQFL TVKEHAERYGLNIVTVRTRIGRGYSLERVFAPAMKRKKKTLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32423; Mature: 32292
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIKEEINSCSHNLIGYKTERLTVLEYAGCEVVTNKKTGKKSRRHQWKCVCTCGHTTIK CCHHHHHHHHHHCCCCCEECCEEEEEEECCCEEEECCCCCCCCCCCCEEEEEEECCCCHH STSSLVYHKVKSCGCQKSEVTAARNKTHGMVGTPEYQSWRGMKERCSNPKGIHWNIYGGK HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCEEEEEECCC GIKICDRWVGDFLAFYEDMGQRPEGMSLDRIDSNGNYCPENCRWADANTQAFNTCRTIQI CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCCCHHHCCEEEEEE TFEGETLSLYRMAEKYGQGEATVRYRLNQGWSIKEALLLPVGDQRIYNKHSKRLEYDGQF EECCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCEECCCCE LTVKEHAERYGLNIVTVRTRIGRGYSLERVFAPAMKRKKKTLS EEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIIKEEINSCSHNLIGYKTERLTVLEYAGCEVVTNKKTGKKSRRHQWKCVCTCGHTTIK CHHHHHHHHHHCCCCCEECCEEEEEEECCCEEEECCCCCCCCCCCCEEEEEEECCCCHH STSSLVYHKVKSCGCQKSEVTAARNKTHGMVGTPEYQSWRGMKERCSNPKGIHWNIYGGK HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCEEEEEECCC GIKICDRWVGDFLAFYEDMGQRPEGMSLDRIDSNGNYCPENCRWADANTQAFNTCRTIQI CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCCCHHHCCEEEEEE TFEGETLSLYRMAEKYGQGEATVRYRLNQGWSIKEALLLPVGDQRIYNKHSKRLEYDGQF EECCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCEECCCCE LTVKEHAERYGLNIVTVRTRIGRGYSLERVFAPAMKRKKKTLS EEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA