| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944708
Identifier: 119944708
GI number: 119944708
Start: 1179516
End: 1180082
Strand: Direct
Name: 119944708
Synonym: Ping_0947
Alternate gene names: NA
Gene position: 1179516-1180082 (Clockwise)
Preceding gene: 119944707
Following gene: 119944714
Centisome position: 25.87
GC content: 39.15
Gene sequence:
>567_bases ATGGATGATATATTATTTCGTCATACTGCAATTGCGACGCCGAATGACAAAAGTGACGAATTTTTGCGCAGGCAGTTTGA TTCAGAGCAAGATAAAACCTTTGTTGATCAGGCAAAAAAATTTGATTTAGAGTTAGAGTCGGTATTAAACGTTGATCCGC CGGATGACATGATCGATAAAATCCTGTTAGAGCAAAGTTTTGCGATTGAAAATAAAAAGAACGTAAACCAGCGTTGGCAT TTAGCTATTGCAGCATCAGTCGCTTTTATTATTGGAATAAGTTTACCACTATTAAATAATCTGAATAACTTTACTCAAGA CATAGGGACAGTAGCGCTTCAACATATCCAAAAAGAGTATTCTTTTACTGAAAAAGTCAATGAAAAAGCCAAGCTCTCTA CTGTCAATGCCAAGCTTGCAAGTTATGGTGGTCTGGCAAAAGATGATCTAGGCGACGTTCTTTATGTGAATCACTGTGCT TTTGACGGGAGGCCCGGATTGCATATGATTATTCAGGGTGAGCAAGGACGTATTACCGTGTTTGTTGTGCCGGATGACGA TGGGTGA
Upstream 100 bases:
>100_bases CTAAATTTAAATAAAAACACCGTATTAACGCGGTTGTTTAGAGCAAAGAATTTATTAAAATCATCATTATCAGCAACAAC TAAAAGTAGTGGGGTAGCAC
Downstream 100 bases:
>100_bases ATAAACTCACCTGATTTTCATAATCAAAATTTTAAAGGTTTGACTGAAAAATTAGGAAAAGTAAGTTTGGTTATTGTTGG TAAAAAGAACGAACCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDDILFRHTAIATPNDKSDEFLRRQFDSEQDKTFVDQAKKFDLELESVLNVDPPDDMIDKILLEQSFAIENKKNVNQRWH LAIAASVAFIIGISLPLLNNLNNFTQDIGTVALQHIQKEYSFTEKVNEKAKLSTVNAKLASYGGLAKDDLGDVLYVNHCA FDGRPGLHMIIQGEQGRITVFVVPDDDG
Sequences:
>Translated_188_residues MDDILFRHTAIATPNDKSDEFLRRQFDSEQDKTFVDQAKKFDLELESVLNVDPPDDMIDKILLEQSFAIENKKNVNQRWH LAIAASVAFIIGISLPLLNNLNNFTQDIGTVALQHIQKEYSFTEKVNEKAKLSTVNAKLASYGGLAKDDLGDVLYVNHCA FDGRPGLHMIIQGEQGRITVFVVPDDDG >Mature_188_residues MDDILFRHTAIATPNDKSDEFLRRQFDSEQDKTFVDQAKKFDLELESVLNVDPPDDMIDKILLEQSFAIENKKNVNQRWH LAIAASVAFIIGISLPLLNNLNNFTQDIGTVALQHIQKEYSFTEKVNEKAKLSTVNAKLASYGGLAKDDLGDVLYVNHCA FDGRPGLHMIIQGEQGRITVFVVPDDDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21106; Mature: 21106
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDILFRHTAIATPNDKSDEFLRRQFDSEQDKTFVDQAKKFDLELESVLNVDPPDDMIDK CCCCHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHH ILLEQSFAIENKKNVNQRWHLAIAASVAFIIGISLPLLNNLNNFTQDIGTVALQHIQKEY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFTEKVNEKAKLSTVNAKLASYGGLAKDDLGDVLYVNHCAFDGRPGLHMIIQGEQGRITV HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE FVVPDDDG EEEECCCC >Mature Secondary Structure MDDILFRHTAIATPNDKSDEFLRRQFDSEQDKTFVDQAKKFDLELESVLNVDPPDDMIDK CCCCHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHH ILLEQSFAIENKKNVNQRWHLAIAASVAFIIGISLPLLNNLNNFTQDIGTVALQHIQKEY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFTEKVNEKAKLSTVNAKLASYGGLAKDDLGDVLYVNHCAFDGRPGLHMIIQGEQGRITV HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE FVVPDDDG EEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA