| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944701
Identifier: 119944701
GI number: 119944701
Start: 1174752
End: 1175231
Strand: Direct
Name: 119944701
Synonym: Ping_0940
Alternate gene names: NA
Gene position: 1174752-1175231 (Clockwise)
Preceding gene: 119944689
Following gene: 119944707
Centisome position: 25.76
GC content: 37.5
Gene sequence:
>480_bases ATGTTAACAAAAAGTAAAATTATACAATTATTATTCATGCTGATCGTTTTAGTGTCGCTTTTTATATGGCGTACTATTAA TATTAAGACAGAGCAACAGATGAACATTGATTTAACCTCCACTGAACGGTCATCTGGACAGCTTGAGTGTGATTATTTGG TACCCTGTGAGTTGCTAAGCTCTCAGGGGCGCTTTTGGTTAAGTGTTGATAACCCAACTATTAAAGCAGAACAATGGATT AATTTCAGGCTTGAGAGTGATGAACAAGAGTGGCGCGTGATCGATGCCAAAATAGTGGGAAAAGAAATGTTTATGGGGCG TATTCCGGTTACTTTTGTGAAGACAGATAAAGGGTTTTTCTCTGCAAAAACCTTGGTTGGAGCCTGCACAACCCCGGCCA TGATCTGGCAACTAAAAATTAACATTCTGGTAAATGGGATTAAAGATCAGCTCTTATTTGATTTTATGGTTAAAAAATAA
Upstream 100 bases:
>100_bases ACATTTTTCTAATTAACAGTTGTAGGTGGATTAATTGTTAATAAACTTATTGTTTATGTTGAAAAATGCGTGTTAACCAT TATTTTTATAAGGACTTTAA
Downstream 100 bases:
>100_bases AATTGCCTGCGCCGTCATATCCAAAAAGGTTATTACGGCTGGGATCTGTTAATTTCCAAGAATTAACCTCGAAAGATAAG CAGACTCTAAATTATTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MLTKSKIIQLLFMLIVLVSLFIWRTINIKTEQQMNIDLTSTERSSGQLECDYLVPCELLSSQGRFWLSVDNPTIKAEQWI NFRLESDEQEWRVIDAKIVGKEMFMGRIPVTFVKTDKGFFSAKTLVGACTTPAMIWQLKINILVNGIKDQLLFDFMVKK
Sequences:
>Translated_159_residues MLTKSKIIQLLFMLIVLVSLFIWRTINIKTEQQMNIDLTSTERSSGQLECDYLVPCELLSSQGRFWLSVDNPTIKAEQWI NFRLESDEQEWRVIDAKIVGKEMFMGRIPVTFVKTDKGFFSAKTLVGACTTPAMIWQLKINILVNGIKDQLLFDFMVKK >Mature_159_residues MLTKSKIIQLLFMLIVLVSLFIWRTINIKTEQQMNIDLTSTERSSGQLECDYLVPCELLSSQGRFWLSVDNPTIKAEQWI NFRLESDEQEWRVIDAKIVGKEMFMGRIPVTFVKTDKGFFSAKTLVGACTTPAMIWQLKINILVNGIKDQLLFDFMVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18400; Mature: 18400
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKSKIIQLLFMLIVLVSLFIWRTINIKTEQQMNIDLTSTERSSGQLECDYLVPCELLS CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHC SQGRFWLSVDNPTIKAEQWINFRLESDEQEWRVIDAKIVGKEMFMGRIPVTFVKTDKGFF CCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEHEEHHHHHHHCCCCEEEEECCCCCE SAKTLVGACTTPAMIWQLKINILVNGIKDQLLFDFMVKK EHHHHHHCCCCCEEEEEEEEEEEEECHHHHHHHHHHHCC >Mature Secondary Structure MLTKSKIIQLLFMLIVLVSLFIWRTINIKTEQQMNIDLTSTERSSGQLECDYLVPCELLS CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHC SQGRFWLSVDNPTIKAEQWINFRLESDEQEWRVIDAKIVGKEMFMGRIPVTFVKTDKGFF CCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEHEEHHHHHHHCCCCEEEEECCCCCE SAKTLVGACTTPAMIWQLKINILVNGIKDQLLFDFMVKK EHHHHHHCCCCCEEEEEEEEEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA