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The map label for this gene is perM [H]

Identifier: 119944689

GI number: 119944689

Start: 1162668

End: 1163753

Strand: Direct

Name: perM [H]

Synonym: Ping_0928

Alternate gene names: 119944689

Gene position: 1162668-1163753 (Clockwise)

Preceding gene: 119944688

Following gene: 119944701

Centisome position: 25.5

GC content: 38.12

Gene sequence:

>1086_bases
ATGTTAAAACAGTTAAATGATTGGTATCAACATCACTTTGCGGATCCCAACCTTAGTGTTCTTTTTTTATTGCTGCTCGG
TGCTTTTGCCGTCTTTTACTTTTTAGGCGGAATTTTAACGCCTCTTTTTGTGGCATTAGTTTTGGCGTATTTACTTGATT
GGCCGATAAACTATTTGATGCGTTTGAAGTTCAATAGAACCCTGTCGACATTAATTGTGATGGCTGTTTTTTTATCCTTA
GCATTTTTTGCCTTCTTAGGAATTTTACCAACCGTATTCAGGCAGGGGGTTGCTTTTATTCGCGACCTGCCCGTCATGTT
CAACCAAGTGCAGGAATATATTTTAACGCTTCCTATTCTATATCCTGATCTCATTGATCCTGCTACTTTTACCCTGCTTG
TTGAAAATTTACGTACTTATATCTTAGATACCGGGGGGTTTTTACTATCACATTCATTGGCTTCATTATTAGATGTCGCA
GCATTACTTGTTTACTGCATTCTTGTGCCTCTGATGATGCTTTTTATGCTCAAAGACAAAAATAAGTTAATTACAAGTTT
TGTTCAGTTTTTACCAAGAGATCGCAAGCTAGCCGATCAGGTTTGGGTTGAAATGAATGGTCAAATTATGAATTATATTC
GCGGTAAGATCATTGAAATCCTGATTGTTGGTATTGGCACTTATTTTACTTTCTTTTTTATGGAATTACGTTATTCAGCA
TTGTTAGCTGTATTGGTTGGTTTATCTGTTTTAATTCCCTATATAGGCGCAGCTGTTGTCACTGTGCCGATTGCGATTGT
GGCATTTTTCCAATGGGGGTCATCACCTGAATTTTTCTATTTGATGGTTGCTTACGCTATTATTCAGGCGCTTGATGGCA
ATGTTATCGTCCCCGTTTTGTTCTCAGAGGCCGTTAATTTGCATCCTGTAGTTATCATTGTCTCGGTATTAATATTTGGA
GGGTTGTGGGGTTTTTGGGGCGTATTTTTTGCTATCCCCTTAGCGACACTTGTTAAGGCGGTATTAAATGCCTGGCCGAA
CACACAAGCTAAGATTGAAAATGCAGAAGAAGATAAGTTAGGTTAA

Upstream 100 bases:

>100_bases
GGCGATAGTGATGCGCATCAGTGCCAACAACTAAACTTGCGAAAGGCTCTGGTTATGCGAATCAGAGCTAATATCTAAAC
TTAAAGGTGTAATAAATTTC

Downstream 100 bases:

>100_bases
ACCGAGAAGGGCTGTTGGCTCTTTTTATCTTTGATGATGCTTACGCTATTATTCAGGCGCTTGATGGCAATGTTATTGTT
CTGGTGTTGTTGTTCTTAGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLKQLNDWYQHHFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLMRLKFNRTLSTLIVMAVFLSL
AFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPILYPDLIDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVA
ALLVYCILVPLMMLFMLKDKNKLITSFVQFLPRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSA
LLAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLFSEAVNLHPVVIIVSVLIFG
GLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKLG

Sequences:

>Translated_361_residues
MLKQLNDWYQHHFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLMRLKFNRTLSTLIVMAVFLSL
AFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPILYPDLIDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVA
ALLVYCILVPLMMLFMLKDKNKLITSFVQFLPRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSA
LLAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLFSEAVNLHPVVIIVSVLIFG
GLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKLG
>Mature_361_residues
MLKQLNDWYQHHFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLMRLKFNRTLSTLIVMAVFLSL
AFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPILYPDLIDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVA
ALLVYCILVPLMMLFMLKDKNKLITSFVQFLPRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSA
LLAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLFSEAVNLHPVVIIVSVLIFG
GLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKLG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=353, Percent_Identity=51.8413597733711, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40657; Mature: 40657

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQLNDWYQHHFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKFNRTLSTLIVMAVFLSLAFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPDLIDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVAALLVYCILVPLMMLFMLKDK
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKLITSFVQFLPRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSA
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVVIIVSVLIFGGLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
G
C
>Mature Secondary Structure
MLKQLNDWYQHHFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLM
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKFNRTLSTLIVMAVFLSLAFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPDLIDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVAALLVYCILVPLMMLFMLKDK
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKLITSFVQFLPRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSA
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVVIIVSVLIFGGLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]