Click here to switch to the map view.

The map label for this gene is 119944648

Identifier: 119944648

GI number: 119944648

Start: 1111965

End: 1113305

Strand: Reverse

Name: 119944648

Synonym: Ping_0887

Alternate gene names: NA

Gene position: 1113305-1111965 (Counterclockwise)

Preceding gene: 119944649

Following gene: 119944638

Centisome position: 24.42

GC content: 41.76

Gene sequence:

>1341_bases
ATGATCAACCCCGTTGTACTCTCAGTCTGCGTGATGCTGGCTTTGTCTTTAATGCGTATTAATGTAGTAATAGCATTAAC
ATTAAGTGCATTAATCGGAGGGTTAAGTGCCGGTATGTCAGTCTCTGATACCGTCAGTGCTTTTGAAGGAGGATTGGGTG
GCGGTGCAACCATTGCATTAAGTTACGCTATGCTGGGTGCATTTGCAGTGGCAATTTCTAAATCAGGTATTACCGATTTA
TTAGCACAAACAGTTATTAATAAAGTACATGGCAGGCACCCGGATCATTTAACCTACGTGATAAAATATGTGGTGTTATC
TTTAATTTTATTAATAACTATTTCATCACAGAATATTATCCCTGTGCATATCGCCTTTATTCCCATTTTAATTCCACCAC
TGATCAGCGTATTTACAAAATTACGTTTAGACAGACGCTTAGTGGCGTGTATATTAACCTTTGGTTTAATCACGCCTTAT
ATGGTTTTACCGATAGGTTTTGGCGGTATCTTTTTAAATAATATATTATTAAAAAATTTACATGATAATGGCCTGGAAGT
AACCGCCAGCCAGGTTCCAACAGCAATGATCTTACCTGCTTTAGGTATGGTTACCGGTTTACTGATTGCAGTCTTTATTA
GCTACCGTAAGCCACGGGATTATCCTCAGGGAGAGTCACTATTTACACCCGCAGAAAATCAAAAACCCGCAAAAACCCCC
TTAAACAAGCGCCATATAGTGGTTGCCTTGATTGCAATTTCAGCAACATTAAGCATACAGTTATTGTCAGGCTCGATGAT
AGTCGGCGCATTGGCTGGATTTGTCGTCTTTACCTTTGGTGGTGTTATAGCTTGGAAAGAAACGCAAGATGTATTTACTA
AAGGTGTGCATATGATGGCAATGATCGGTTTTATTATGATTGCCGCTGCCGGTTTTACAGCCGTAATGAAAGCCACGGGT
AGCGTAGACACCCTGGTTGAGATGTTATCTGCAAATATTGGCCAAAATAAACCACTAGCAGCCGTATTAATGCTGGTAGT
CGGTTTGTTAGTGACCATGGGAATAGGCTCTTCTTTTTCAACTATTCCAATTATTGCCACTATTTACGTTCCTCTTGCCC
TCTCATTTGGATTTTCACCGATGGCAATCATCGCATTAGTTGGAACAGCAGCGGCGTTGGGGGATGCAGGTTCACCGGCG
TCGGACTCGACTCTGGGGCCGACAGCGGGTCTAAACGCCGATGGTAAACACGATCATATTTGGGATACCGTTGTACCGAC
CTTTATTCACTATAACCTACCCTTAATGGTATTTGGCTGGATTGCAGCGATGAGTTTGTAA

Upstream 100 bases:

>100_bases
CCCTAACAAAAAAGCGTCTAATATCCTTAATTAAATTTGCCATCAAAAAATACTCGCGTAAGATGCCGACTTTATTTTAT
TGAATGAGTTAGGAAAATTT

Downstream 100 bases:

>100_bases
CCCTTAAAACATGGCCACTACGTTTAATATAGTGGTACTAAAAAAGCAGGCAGCTAAACTGCTTGCTTTTTTACAGGGAT
AAAAAAATAAAGCACTTAGC

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIALSYAMLGAFAVAISKSGITDL
LAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNIIPVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPY
MVLPIGFGGIFLNNILLKNLHDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP
LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMAMIGFIMIAAAGFTAVMKATG
SVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFSTIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPA
SDSTLGPTAGLNADGKHDHIWDTVVPTFIHYNLPLMVFGWIAAMSL

Sequences:

>Translated_446_residues
MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIALSYAMLGAFAVAISKSGITDL
LAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNIIPVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPY
MVLPIGFGGIFLNNILLKNLHDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP
LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMAMIGFIMIAAAGFTAVMKATG
SVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFSTIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPA
SDSTLGPTAGLNADGKHDHIWDTVVPTFIHYNLPLMVFGWIAAMSL
>Mature_446_residues
MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIALSYAMLGAFAVAISKSGITDL
LAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNIIPVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPY
MVLPIGFGGIFLNNILLKNLHDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP
LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMAMIGFIMIAAAGFTAVMKATG
SVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFSTIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPA
SDSTLGPTAGLNADGKHDHIWDTVVPTFIHYNLPLMVFGWIAAMSL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 46758; Mature: 46758

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHH
SYAMLGAFAVAISKSGITDLLAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNII
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
PVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPYMVLPIGFGGIFLNNILLKNL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
HDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP
CCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMA
CCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH
MIGFIMIAAAGFTAVMKATGSVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
TIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPASDSTLGPTAGLNADGKHDHI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
WDTVVPTFIHYNLPLMVFGWIAAMSL
HHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHH
SYAMLGAFAVAISKSGITDLLAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNII
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
PVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPYMVLPIGFGGIFLNNILLKNL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
HDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP
CCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMA
CCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH
MIGFIMIAAAGFTAVMKATGSVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
TIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPASDSTLGPTAGLNADGKHDHI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
WDTVVPTFIHYNLPLMVFGWIAAMSL
HHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]