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The map label for this gene is ybfF [C]

Identifier: 119944638

GI number: 119944638

Start: 1096057

End: 1096839

Strand: Reverse

Name: ybfF [C]

Synonym: Ping_0877

Alternate gene names: 119944638

Gene position: 1096839-1096057 (Counterclockwise)

Preceding gene: 119944648

Following gene: 119944637

Centisome position: 24.06

GC content: 37.42

Gene sequence:

>783_bases
ATGCTCCTTAATTACCAACAGAAAAAATCGACTTTACCCGAGTCAAAACAACCCGCTGAAAATATTTTCATCATACACGG
GTTATTTGGCAGTTTATCAAACCTCTCTGGTTTGGCGAGTGAATTACAAGAGCTATATCACACTATTTCTGTTGATTTGA
GAAACCATGGTAACAGCCCGCATGATAACTCAATGACTTATATCGAAATGGCTAATGATATATTTTCATTAGCAGATCAT
CTTAATATTGAACACTTTTCTATTGTGGGCCATTCGATGGGCGGAAAAGTAGCCATGGCCTGCGCTTTATTAAATCCGCA
GCGTGTTAATAAAATAATCGTCGCGGATATTGCACCGGTAGTCTACACCGATAAACATAATGATGTCTTTATTGGCTTAA
ATGCGCTTGCAAATGAACCAATTCAAACCAGAAAAACAGCGGAATTAACCTTAAGCCCCTATATTACAATACCGGAAACT
CGTCAGTTTTTACTTAAGTCATTAAGAAAAAAGGGAGAAAACTTTCACCTGCTGTTTAATTTACCGGCACTTAGCGCAAA
CTATGCGACCATTAGAAGCTGGCCGGAATTTGATGATATTTTTAATAAAGAAGCGCTTTTTATAAAAGGAGCCGATTCTG
ATTATATCCTGCCTGAATATCAGGCTAATATTTTACACTACTTCCCCAATGCCAAAGCCAAAATGATTAAAGATACAGGC
CATTGGTTACATGCTGAGAAACCCAAGACCTTTAATCGTTTAGTGAAAGAATTTCTCAAATGA

Upstream 100 bases:

>100_bases
CATAATGCAATATTTTGTCATTTATATATAATCTGCAAACATTCTTATTTTTCATATGTAATAATGTTTGTCCGTATATT
TAGCTTTAAGACAGAATCTG

Downstream 100 bases:

>100_bases
AAAACAAAGCATGTGTTTTTCACCCGGAAGTCAAGTGCCTAAAATCTTACTCCCAATAGCCCAATGTATATGTTATATTC
TCCCCTCTTTTTTGAATGGA

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLLNYQQKKSTLPESKQPAENIFIIHGLFGSLSNLSGLASELQELYHTISVDLRNHGNSPHDNSMTYIEMANDIFSLADH
LNIEHFSIVGHSMGGKVAMACALLNPQRVNKIIVADIAPVVYTDKHNDVFIGLNALANEPIQTRKTAELTLSPYITIPET
RQFLLKSLRKKGENFHLLFNLPALSANYATIRSWPEFDDIFNKEALFIKGADSDYILPEYQANILHYFPNAKAKMIKDTG
HWLHAEKPKTFNRLVKEFLK

Sequences:

>Translated_260_residues
MLLNYQQKKSTLPESKQPAENIFIIHGLFGSLSNLSGLASELQELYHTISVDLRNHGNSPHDNSMTYIEMANDIFSLADH
LNIEHFSIVGHSMGGKVAMACALLNPQRVNKIIVADIAPVVYTDKHNDVFIGLNALANEPIQTRKTAELTLSPYITIPET
RQFLLKSLRKKGENFHLLFNLPALSANYATIRSWPEFDDIFNKEALFIKGADSDYILPEYQANILHYFPNAKAKMIKDTG
HWLHAEKPKTFNRLVKEFLK
>Mature_260_residues
MLLNYQQKKSTLPESKQPAENIFIIHGLFGSLSNLSGLASELQELYHTISVDLRNHGNSPHDNSMTYIEMANDIFSLADH
LNIEHFSIVGHSMGGKVAMACALLNPQRVNKIIVADIAPVVYTDKHNDVFIGLNALANEPIQTRKTAELTLSPYITIPET
RQFLLKSLRKKGENFHLLFNLPALSANYATIRSWPEFDDIFNKEALFIKGADSDYILPEYQANILHYFPNAKAKMIKDTG
HWLHAEKPKTFNRLVKEFLK

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200012, Length=254, Percent_Identity=34.251968503937, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI23200008, Length=254, Percent_Identity=34.251968503937, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI223941839, Length=248, Percent_Identity=29.8387096774194, Blast_Score=109, Evalue=2e-24,
Organism=Escherichia coli, GI1786902, Length=260, Percent_Identity=38.0769230769231, Blast_Score=177, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17508535, Length=251, Percent_Identity=32.6693227091633, Blast_Score=131, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17507063, Length=264, Percent_Identity=25, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321468, Length=273, Percent_Identity=32.2344322344322, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24640348, Length=273, Percent_Identity=29.3040293040293, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24646055, Length=282, Percent_Identity=27.6595744680851, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 29462; Mature: 29462

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNYQQKKSTLPESKQPAENIFIIHGLFGSLSNLSGLASELQELYHTISVDLRNHGNSP
CCCCCCHHHHCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCC
HDNSMTYIEMANDIFSLADHLNIEHFSIVGHSMGGKVAMACALLNPQRVNKIIVADIAPV
CCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHEECCCHHHHCEEEEEECCCE
VYTDKHNDVFIGLNALANEPIQTRKTAELTLSPYITIPETRQFLLKSLRKKGENFHLLFN
EEECCCCCEEEEEHHHCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHCCCCEEEEEE
LPALSANYATIRSWPEFDDIFNKEALFIKGADSDYILPEYQANILHYFPNAKAKMIKDTG
CCCCCCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCHHHCCEEEECCCCCEEEEECCC
HWLHAEKPKTFNRLVKEFLK
CEEECCCCHHHHHHHHHHHC
>Mature Secondary Structure
MLLNYQQKKSTLPESKQPAENIFIIHGLFGSLSNLSGLASELQELYHTISVDLRNHGNSP
CCCCCCHHHHCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCC
HDNSMTYIEMANDIFSLADHLNIEHFSIVGHSMGGKVAMACALLNPQRVNKIIVADIAPV
CCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHEECCCHHHHCEEEEEECCCE
VYTDKHNDVFIGLNALANEPIQTRKTAELTLSPYITIPETRQFLLKSLRKKGENFHLLFN
EEECCCCCEEEEEHHHCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHHCCCCEEEEEE
LPALSANYATIRSWPEFDDIFNKEALFIKGADSDYILPEYQANILHYFPNAKAKMIKDTG
CCCCCCCCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCHHHCCEEEECCCCCEEEEECCC
HWLHAEKPKTFNRLVKEFLK
CEEECCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]