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The map label for this gene is cmoB

Identifier: 119944468

GI number: 119944468

Start: 886899

End: 887885

Strand: Reverse

Name: cmoB

Synonym: Ping_0697

Alternate gene names: 119944468

Gene position: 887885-886899 (Counterclockwise)

Preceding gene: 119944469

Following gene: 119944467

Centisome position: 19.47

GC content: 42.76

Gene sequence:

>987_bases
ATGATCGACTTTACAAACTTCTACAGCAGCATCGCTAAAAACCGTTTAAGCCATTGGTTACGGACTCTGCCAATGCAGTT
ACATGAATGGGAAAATACCCATGTGCATGGCCAATTAGCCAGTTGGATTAGGGTCTTAAATAAGTTTCCTGATATTAAAA
CGAGTCATATCGAGCTTAAAGATCGTGTTGAGATAGGATCTGCCACTGAATTATCACCGGGTGAAACCAAAAAACTGGAA
AATTTATTACAAAAATTTCATCCCTGGCGCAAAGGCCCCTTTGTCATTCACGGAATACATATTGATACAGAATGGCGCAG
TGATTGGAAATGGGATCGGCTACTGCCGCATATTAGCCCGCTTAAATACCGTTATGTCTTAGATGTGGGTTGTGGCAGCG
GTTATCATATGTGGCGTATGCGCGGTGAAGGTGCTGAATTTGTTGTTGGCATTGATCCCAGTGAGCTGTTTTTATGCCAG
TTTGAAGCTGTGCGCCATTTTGCCAATAAAGAGCAAAATGTACATTTATTACCTTTAGGTATTCAGGAACTGCCTAAGTT
AGGCGCTTTTGATACGGTCTTTTCAATGGGCGTTTTATATCACAGAAAATCGCCCATGGATCATATTACCCAGTTGCAGG
ATCAGTTGGTCGAAGGCGGCGAACTGGTACTCGAAACCCTCGTCATTGGCGGTGATGAAAATGCGGTATTAGTGCCTCAG
GACAGATATGCAAAAATGCGCAATATCTGGTTTTTACCCAGCGCACAAGCGTTAAAACTATGGGTTGAAAAGTGCGGTTT
TGAAAATGTGCGCATTGCCGATATTAACGATACCTTAACTGGCGAGCAGCGCAGTACTGCCTGGATGACCAATGAATCAC
TGGAGGATTATTTAGATCCTAATGATCCCAGCAGAACAGTAGAAGGTTACCCGGCACCAAAACGTGCCTTATTAATTGCT
AAAAAAGCCATAAAAGCATTAAGTTAA

Upstream 100 bases:

>100_bases
CAATCAGCATTAAATAACCCTTTAAATCGGGGGTTAACAATCAGCATTAAATAACCCTTCAAAAAGGGAAGATACACATA
AAATTATCACAAGGTTCGCC

Downstream 100 bases:

>100_bases
ACAGGTAAAATTAATAGTGATTAAGCTTTGAACTGGAGGGGTGAGGGCTGACGCAGTGATGTATGAGTGACTGTGTTAAA
ACCATTATTGCTAAAATAAG

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIDFTNFYSSIAKNRLSHWLRTLPMQLHEWENTHVHGQLASWIRVLNKFPDIKTSHIELKDRVEIGSATELSPGETKKLE
NLLQKFHPWRKGPFVIHGIHIDTEWRSDWKWDRLLPHISPLKYRYVLDVGCGSGYHMWRMRGEGAEFVVGIDPSELFLCQ
FEAVRHFANKEQNVHLLPLGIQELPKLGAFDTVFSMGVLYHRKSPMDHITQLQDQLVEGGELVLETLVIGGDENAVLVPQ
DRYAKMRNIWFLPSAQALKLWVEKCGFENVRIADINDTLTGEQRSTAWMTNESLEDYLDPNDPSRTVEGYPAPKRALLIA
KKAIKALS

Sequences:

>Translated_328_residues
MIDFTNFYSSIAKNRLSHWLRTLPMQLHEWENTHVHGQLASWIRVLNKFPDIKTSHIELKDRVEIGSATELSPGETKKLE
NLLQKFHPWRKGPFVIHGIHIDTEWRSDWKWDRLLPHISPLKYRYVLDVGCGSGYHMWRMRGEGAEFVVGIDPSELFLCQ
FEAVRHFANKEQNVHLLPLGIQELPKLGAFDTVFSMGVLYHRKSPMDHITQLQDQLVEGGELVLETLVIGGDENAVLVPQ
DRYAKMRNIWFLPSAQALKLWVEKCGFENVRIADINDTLTGEQRSTAWMTNESLEDYLDPNDPSRTVEGYPAPKRALLIA
KKAIKALS
>Mature_328_residues
MIDFTNFYSSIAKNRLSHWLRTLPMQLHEWENTHVHGQLASWIRVLNKFPDIKTSHIELKDRVEIGSATELSPGETKKLE
NLLQKFHPWRKGPFVIHGIHIDTEWRSDWKWDRLLPHISPLKYRYVLDVGCGSGYHMWRMRGEGAEFVVGIDPSELFLCQ
FEAVRHFANKEQNVHLLPLGIQELPKLGAFDTVFSMGVLYHRKSPMDHITQLQDQLVEGGELVLETLVIGGDENAVLVPQ
DRYAKMRNIWFLPSAQALKLWVEKCGFENVRIADINDTLTGEQRSTAWMTNESLEDYLDPNDPSRTVEGYPAPKRALLIA
KKAIKALS

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=63.0434782608696, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_PSYIN (A1SST4)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942148.1
- ProteinModelPortal:   A1SST4
- STRING:   A1SST4
- GeneID:   4627028
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_0697
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- PhylomeDB:   A1SST4
- ProtClustDB:   PRK15068
- BioCyc:   PING357804:PING_0697-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 37776; Mature: 37776

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFTNFYSSIAKNRLSHWLRTLPMQLHEWENTHVHGQLASWIRVLNKFPDIKTSHIELK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEH
DRVEIGSATELSPGETKKLENLLQKFHPWRKGPFVIHGIHIDTEWRSDWKWDRLLPHISP
HHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LKYRYVLDVGCGSGYHMWRMRGEGAEFVVGIDPSELFLCQFEAVRHFANKEQNVHLLPLG
CEEEEEEEECCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECC
IQELPKLGAFDTVFSMGVLYHRKSPMDHITQLQDQLVEGGELVLETLVIGGDENAVLVPQ
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECC
DRYAKMRNIWFLPSAQALKLWVEKCGFENVRIADINDTLTGEQRSTAWMTNESLEDYLDP
HHHHHHHCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHCCC
NDPSRTVEGYPAPKRALLIAKKAIKALS
CCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDFTNFYSSIAKNRLSHWLRTLPMQLHEWENTHVHGQLASWIRVLNKFPDIKTSHIELK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEH
DRVEIGSATELSPGETKKLENLLQKFHPWRKGPFVIHGIHIDTEWRSDWKWDRLLPHISP
HHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LKYRYVLDVGCGSGYHMWRMRGEGAEFVVGIDPSELFLCQFEAVRHFANKEQNVHLLPLG
CEEEEEEEECCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECC
IQELPKLGAFDTVFSMGVLYHRKSPMDHITQLQDQLVEGGELVLETLVIGGDENAVLVPQ
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECC
DRYAKMRNIWFLPSAQALKLWVEKCGFENVRIADINDTLTGEQRSTAWMTNESLEDYLDP
HHHHHHHCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHCCC
NDPSRTVEGYPAPKRALLIAKKAIKALS
CCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA