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The map label for this gene is nudL [H]

Identifier: 119944467

GI number: 119944467

Start: 886126

End: 886719

Strand: Reverse

Name: nudL [H]

Synonym: Ping_0696

Alternate gene names: 119944467

Gene position: 886719-886126 (Counterclockwise)

Preceding gene: 119944468

Following gene: 119944466

Centisome position: 19.45

GC content: 38.05

Gene sequence:

>594_bases
ATGAATAAACAAATTTTTTTAAGTCGTTTTTTATTTCATAATAGACAAAATGTTTCTGACCTGATCGCGCATAAGTCCCC
TCTTAATTTAAACCAACAAGGGTTAAAAAAAGCCGCTGTTTTGTTACCTTTGATAAAGCGCCAAAATGGCTTAAACCTAA
TATTTACTGAACGGGCTTTACATTTACGTCACCACCCTGGACAAATTAGTTTTCCTGGCGGCCGATATGAGCCATCGGAT
CATTCTTTACAGCAAACAGCCCTGCGCGAAACAGAAGAAGAGATCGGTATTTTACAGCGCCAGGTAAGTCTCTTTGGTTC
ATTGCCTAATCTACCGACAGGAAGTGGATTTATGATTAGCCCTTTTCTCGGTTTTATCGATAATGAGCATACTATCGCAA
TTGAGCCGCAGGAGGTACGCAGTGTTTTTGAAGTGCCCCTTTCTTACCTCTTAGATGTCAATAATTATTATAAACAACAT
TTATTTACCCATAAAAAACGTCACTTCACTTATTGTATTCCATACCAAAACAGATTAATTTGGGGAGCAACAGCGCAAAT
TCTTAAAAACCTACAGGAGCATTTAGCCAAGTAA

Upstream 100 bases:

>100_bases
AACCATTATTGCTAAAATAAGCCGCGCGTCCAGCAACTTTGTGCCATGCACTCCTTTGCTGTTATGATTAATACACCCAA
TATTTTTTAGGTTTTTTTGA

Downstream 100 bases:

>100_bases
TCCCCTTAATCTTTAATTAAAAAATAAAACTCACAAAAAATGACTCAATACGCACCAAAATTACGGCTGGCCTTTAGTGC
TTATTTACAAAAAAATAAAC

Product: nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNKQIFLSRFLFHNRQNVSDLIAHKSPLNLNQQGLKKAAVLLPLIKRQNGLNLIFTERALHLRHHPGQISFPGGRYEPSD
HSLQQTALRETEEEIGILQRQVSLFGSLPNLPTGSGFMISPFLGFIDNEHTIAIEPQEVRSVFEVPLSYLLDVNNYYKQH
LFTHKKRHFTYCIPYQNRLIWGATAQILKNLQEHLAK

Sequences:

>Translated_197_residues
MNKQIFLSRFLFHNRQNVSDLIAHKSPLNLNQQGLKKAAVLLPLIKRQNGLNLIFTERALHLRHHPGQISFPGGRYEPSD
HSLQQTALRETEEEIGILQRQVSLFGSLPNLPTGSGFMISPFLGFIDNEHTIAIEPQEVRSVFEVPLSYLLDVNNYYKQH
LFTHKKRHFTYCIPYQNRLIWGATAQILKNLQEHLAK
>Mature_197_residues
MNKQIFLSRFLFHNRQNVSDLIAHKSPLNLNQQGLKKAAVLLPLIKRQNGLNLIFTERALHLRHHPGQISFPGGRYEPSD
HSLQQTALRETEEEIGILQRQVSLFGSLPNLPTGSGFMISPFLGFIDNEHTIAIEPQEVRSVFEVPLSYLLDVNNYYKQH
LFTHKKRHFTYCIPYQNRLIWGATAQILKNLQEHLAK

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=115, Percent_Identity=41.7391304347826, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI1788115, Length=186, Percent_Identity=32.7956989247312, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17536993, Length=140, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17510677, Length=159, Percent_Identity=29.559748427673, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18859683, Length=128, Percent_Identity=35.15625, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22746; Mature: 22746

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQIFLSRFLFHNRQNVSDLIAHKSPLNLNQQGLKKAAVLLPLIKRQNGLNLIFTERAL
CCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
HLRHHPGQISFPGGRYEPSDHSLQQTALRETEEEIGILQRQVSLFGSLPNLPTGSGFMIS
HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH
PFLGFIDNEHTIAIEPQEVRSVFEVPLSYLLDVNNYYKQHLFTHKKRHFTYCIPYQNRLI
HHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEE
WGATAQILKNLQEHLAK
EHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKQIFLSRFLFHNRQNVSDLIAHKSPLNLNQQGLKKAAVLLPLIKRQNGLNLIFTERAL
CCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
HLRHHPGQISFPGGRYEPSDHSLQQTALRETEEEIGILQRQVSLFGSLPNLPTGSGFMIS
HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH
PFLGFIDNEHTIAIEPQEVRSVFEVPLSYLLDVNNYYKQHLFTHKKRHFTYCIPYQNRLI
HHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEE
WGATAQILKNLQEHLAK
EHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA