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The map label for this gene is rtxA

Identifier: 119944453

GI number: 119944453

Start: 868165

End: 868521

Strand: Direct

Name: rtxA

Synonym: Ping_0681

Alternate gene names: NA

Gene position: 868165-868521 (Clockwise)

Preceding gene: 119944452

Following gene: 119944455

Centisome position: 19.04

GC content: 38.94

Gene sequence:

>357_bases
ATGTATCAGTTGATTTTTTATGTACCAGTTTCACATCTAGGAAGCGTAAAAAGTGCCTTATTTAAAGCAGGGGCGGGGCG
TATTGGGGATTATGATTGTTGTGCATGGCAAACTCTGGGAGATGGCCAATATCGTCCTCTTGCTGCGAGTAATGCTTTTA
TTGGTACAAAAAATCAAATGACAAAAATAGCCGAATATAAAGTTGAAATGGTCTGCTCAGCAGAGATAATTCAATCGGCT
TTACAAGCATTAATAAACTCTCATCCCTATGAGATGCCCGCGTATGCCGTTCTGGAAATAAAAACAGTGGAAAATTTTGA
TTTTCAGTCTAAACAGCTTGTGCTTAATGGCTGTTGA

Upstream 100 bases:

>100_bases
AACACTACGGTGCAAGTTCGAAATCTTGAACTCTAGCCTTTTGAATTATAACGTTTACTTATTCGATAATCATATTGGCT
GCTAATAAAAGGGAAATAAA

Downstream 100 bases:

>100_bases
ATGAGCCTTTTCGGGGTTGATGGAGCAGCCTTATGACTGCTCTTTTATTACTGGCTGAGCAACTTTCAACTTGATAAATG
CAATCGCTTGTTTATTTAAG

Product: structural toxin protein RtxA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MYQLIFYVPVSHLGSVKSALFKAGAGRIGDYDCCAWQTLGDGQYRPLAASNAFIGTKNQMTKIAEYKVEMVCSAEIIQSA
LQALINSHPYEMPAYAVLEIKTVENFDFQSKQLVLNGC

Sequences:

>Translated_118_residues
MYQLIFYVPVSHLGSVKSALFKAGAGRIGDYDCCAWQTLGDGQYRPLAASNAFIGTKNQMTKIAEYKVEMVCSAEIIQSA
LQALINSHPYEMPAYAVLEIKTVENFDFQSKQLVLNGC
>Mature_118_residues
MYQLIFYVPVSHLGSVKSALFKAGAGRIGDYDCCAWQTLGDGQYRPLAASNAFIGTKNQMTKIAEYKVEMVCSAEIIQSA
LQALINSHPYEMPAYAVLEIKTVENFDFQSKQLVLNGC

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 13034; Mature: 13034

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLIFYVPVSHLGSVKSALFKAGAGRIGDYDCCAWQTLGDGQYRPLAASNAFIGTKNQM
CEEEEEECCCHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCCEECCCHHH
TKIAEYKVEMVCSAEIIQSALQALINSHPYEMPAYAVLEIKTVENFDFQSKQLVLNGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MYQLIFYVPVSHLGSVKSALFKAGAGRIGDYDCCAWQTLGDGQYRPLAASNAFIGTKNQM
CEEEEEECCCHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCCEECCCHHH
TKIAEYKVEMVCSAEIIQSALQALINSHPYEMPAYAVLEIKTVENFDFQSKQLVLNGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]