Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944407

Identifier: 119944407

GI number: 119944407

Start: 816652

End: 818448

Strand: Reverse

Name: 119944407

Synonym: Ping_0635

Alternate gene names: NA

Gene position: 818448-816652 (Counterclockwise)

Preceding gene: 119944408

Following gene: 119944403

Centisome position: 17.95

GC content: 39.62

Gene sequence:

>1797_bases
ATGCAAAGAGATTTTATGAAACTTAATATTTTAACCTCCGTTATTTTATCAACGACACTTATCGCTTGTTCAGCGACTCC
ACCGCAAACTAATCTTATTGAAAAAAAACAAACTATTCAATTAGTTGAGCAAGGTCGTTATCACTCGAACATCTTTGATG
AAAGTGCTGCTGAGATTGTGACTTACGACAAAAAAACGCAAAATACCTTTGTGGTTAATGCGGAGTCGGGCAAAGTCGAT
GTTGTTCGCAGTGCTGATATTAATAAACCAACATTACTGAGCAGCTTAAATATTGGTGCTGATATACAAAAACATCTTAA
TAAACAAGCAGGTGCCGCTAATAGTGTTGATGTGTCTGATGGATTGCTTGCTGTCGCCATTGAAGCCGAAAATAAAACAG
ATACAGGCTGGGTAGCCTTTTATGACACCCAAAACCTGACATATATTGATGCTGTTTATGTTGGGGCTCTCCCTGATATG
GTGACCTTCAGCGCAAATGGTAAACAGTTAGTGGTGGCTCTTGAAGGTGAACCTTCGGATAAAAATTATGCGCTAGATCC
CGTGGGTGAAATAGCAGTCATTGATATCGACTGGCAAAAAAATACATTAAAAACGACGGTGACACGGATTAATTTCCATG
AATTTAATCAGGGAGGTACGCGATTTAATGAATTACCCGAACAGTTGGTATTAAATGGTTTTCAAGCAAGCGTGGAACAG
GATTTAGAGCCCGAGTATATTGCAATAAATAAAAGCTCAACCAAGGCCTATGTGAGTTTGCAGGAAAATAACGCCATTGC
AGTAATTAATCTGGCTGATAAGTCTATTGAAAAAATAATGGCATTAGGTTTTAAAGATCATTTACAATCGGGTAATGAGT
TGGATGGTAATAACAAAGACAAACAAGCCTTGCTTAAGAATGAACCTGCCCTAGGCATGTATCAGCCGGATTCCATTGCC
GTGGTCACTATTGGCGGAACTGATTATGTACTGACAGCGAACGAAGGAGATGATCGCAGTGATTGGCTAACTGATTTATC
TATAGCTGATTGTGAAGCGGGTGATTATTATTTTAATTTGGAAGACAAAGCCTGTGGCGATGATATTAAATTAAAAGATG
CCTTTGACGGTGGTATTTATAAACCTTCGGATCAGCAAAACAGGTTGGATTTAAGCAATTTTCAGCAAGGGGGTATTTAC
CAAGATGCGGTTAAAACGCTTAAATTTTCTCACTCTGCCACTAAACAATTTGGCGACTTAAATGCTGATGGAAAAATTGA
TCGCATACTGACCTTTGGTGGACGTTCATTTTCCATTTGGAATGTCGATGCAGAGCAATTGATTTTTGATTCAGGTAGTG
ATTTTGAACGCATTACCGCACAGAAATACGGTGCTAATTTCAACCAAACCCACAGTAAAAACAAAGCTGAGAATCGTAGT
GGCAAAAAGGGCCCTGAGCCTGAAGCCTTAACGACCGGTATTATTGATGGGATAACTTATGCCTTTATTGGCCTTGAGCG
AATGGGCGGCATTATGGTTTATAATATTTCTGATCCTGCTAATGCACAGTTTGTACAGTATCTTAATAACCGGGATTTGA
GCGTGGATCCCAAAGATAATATTGCAAAAGATGCCAATCACGTAAAGACCTATAACGTCGATGCCGGTGATTTAGGACCC
GAAGGTTTCCGTTTTGTGGCCGCTAAAGACAGCCCCACTAACAACCCTATTCTTATTGTCGGTAATGAAGTCAGCGGTAC
AACAAGCTTCTATCGTATTGATTCATTAGCGAAATAA

Upstream 100 bases:

>100_bases
GTAACTGCTTGCGCCCCATAAACGTTGACTCTATTAATGTTATTTTCATCTGTCTGTCATATTAGTCAGGTATAAAAGTG
GCTAACTTCTAATTCCAGCC

Downstream 100 bases:

>100_bases
AAATGATATAAGGTAAGTGCCTGCGCTTACCTTATTTATGCAGTTATTTGTTATCCAATCGACTGATGAATCAATTCCAG
CAAAGGTGCGGGTAATTTTA

Product: transcriptional regulator, MerR family protein

Products: NA

Alternate protein names: Alkaline Phosphatase-Like Protein; 5-Nucleotidase Domain Protein; MerR Family Transcriptional Regulator; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase; Transcriptional Regulator MerR Family Protein; CHU Large Protein; Metallophosphoesterase; PEP-CTERM Exosortase Interaction Domain Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; 5-Nucleotidase C-Terminal Domain Protein; Ig Domain Domain Protein; Collagen Triple Helix Repeat Protein; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Ig Family Protein; Atypical Alkaline Phosphatase With Phytase-Like Insertion

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD
VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM
VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ
DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA
VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY
QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS
GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP
EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK

Sequences:

>Translated_598_residues
MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD
VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM
VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ
DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA
VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY
QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS
GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP
EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK
>Mature_598_residues
MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD
VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM
VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ
DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA
VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY
QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS
GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP
EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65529; Mature: 65529

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIV
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEE
TYDKKTQNTFVVNAESGKVDVVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSD
EECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
GLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDMVTFSANGKQLVVALEGEPSD
CEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC
KNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ
CCEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCHHHHHHCCHHHHHHC
DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKD
CCCCCEEEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCH
KQALLKNEPALGMYQPDSIAVVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNL
HHHHHHCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCEEECCCCCCEEEEC
EDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIYQDAVKTLKFSHSATKQFGDL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCC
NADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS
CCCCCEEEEEEECCCEEEEEECCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCC
IAKDANHVKTYNVDAGDLGPEGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK
HHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIV
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEE
TYDKKTQNTFVVNAESGKVDVVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSD
EECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
GLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDMVTFSANGKQLVVALEGEPSD
CEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC
KNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ
CCEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCHHHHHHCCHHHHHHC
DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKD
CCCCCEEEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCH
KQALLKNEPALGMYQPDSIAVVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNL
HHHHHHCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCEEECCCCCCEEEEC
EDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIYQDAVKTLKFSHSATKQFGDL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCC
NADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS
CCCCCEEEEEEECCCEEEEEECCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCC
IAKDANHVKTYNVDAGDLGPEGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK
HHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA