Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is menA [H]
Identifier: 119944138
GI number: 119944138
Start: 458186
End: 459100
Strand: Direct
Name: menA [H]
Synonym: Ping_0356
Alternate gene names: 119944138
Gene position: 458186-459100 (Clockwise)
Preceding gene: 119944130
Following gene: 119944139
Centisome position: 10.05
GC content: 38.8
Gene sequence:
>915_bases ATGAGTAATATTTCAGTTTGGCTAAGCGAATTACGTTTACGTACATTACCGCTTGCAGCAGCTTCAATTATTTTAGGGGC TGGGATAGCCATTCAAGCACAAATATTTGACCTGTTGATTTTTAGTTTATCGCTTATTACCGCTTTGTTATTACAGATTT TATCAAATCTTGCCAATGATTATGGTGATGCCATCTCCGGGGTAGACAATGGCAAGCGTGTTGGTCCGTTACGCGCAATG CAGAGCGGTGCTATCAGCCAAAAAAGCCTGAAAATTGCGATCCTGTTAACGACTAGTTTAGTGGTGGTGTCGGGCATCAC TTTACTGGTTATTGCATTAGGTTCAAATTCAACGAGTTGGGTAGTTTTTTTGTTGCTTGGTTTATTAGCTATTGTCGCTG CGATAACCTATACAATGGGAAAATTACATTATGGATACAGAGCGATGGGCGATCTTGCTGTGTTTCTGTTTTTTGGCTTA GTAGGAGTAGTCGGCAGTTATTACCTTTATGGTTTAACTTTTAGCTGGTCCTTACTTTTACCGGCAACCAGTGTCGGGCT TTTATCCGCAGCTGTTTTAAATATTAATAATATGCGTGATATTTATACGGATAAAGAGGCCCATAAAACAACTTTGGTGG TTTTATGGGGGCTGAAAAATGCTTTTATCTATCACTTGTCCCTTATTGTCGGTGCTTTTATCTGTGCCGTTTACTATTTT AGTCAGCTTGAAAATGTACAAGCCTGGCAATTTATTTTTTTGCTTAGCTTTAGTCCGCTAATCAAGAGTTGTCTGATATT AAAGGAGGCGATCTCCAAAGATATTCGTGACGGTCAGGTATTTAATGATGAGCTTAAAAACACGGCATTATCCACCTTTG TTTTTAGTCTTTTATTTGCGCTGGTATTAATTTAG
Upstream 100 bases:
>100_bases GCTCATGATATATTGACGGATTAAGGTTTGTTAATGTAGCGCGATTAACAGCCGATTCCTAGCGGAACCGCGTATAACCA CACTTTTTTAGGATATTTAG
Downstream 100 bases:
>100_bases ATGCATTAAACCCATTTTTAGTTTCTTACCACTTTCAGAACTTGGATAAGCGCGCTTTTGTACGCTTATTTTAACCGGAG CTTAGCTGTTTTTATAAAAA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSNISVWLSELRLRTLPLAAASIILGAGIAIQAQIFDLLIFSLSLITALLLQILSNLANDYGDAISGVDNGKRVGPLRAM QSGAISQKSLKIAILLTTSLVVVSGITLLVIALGSNSTSWVVFLLLGLLAIVAAITYTMGKLHYGYRAMGDLAVFLFFGL VGVVGSYYLYGLTFSWSLLLPATSVGLLSAAVLNINNMRDIYTDKEAHKTTLVVLWGLKNAFIYHLSLIVGAFICAVYYF SQLENVQAWQFIFLLSFSPLIKSCLILKEAISKDIRDGQVFNDELKNTALSTFVFSLLFALVLI
Sequences:
>Translated_304_residues MSNISVWLSELRLRTLPLAAASIILGAGIAIQAQIFDLLIFSLSLITALLLQILSNLANDYGDAISGVDNGKRVGPLRAM QSGAISQKSLKIAILLTTSLVVVSGITLLVIALGSNSTSWVVFLLLGLLAIVAAITYTMGKLHYGYRAMGDLAVFLFFGL VGVVGSYYLYGLTFSWSLLLPATSVGLLSAAVLNINNMRDIYTDKEAHKTTLVVLWGLKNAFIYHLSLIVGAFICAVYYF SQLENVQAWQFIFLLSFSPLIKSCLILKEAISKDIRDGQVFNDELKNTALSTFVFSLLFALVLI >Mature_303_residues SNISVWLSELRLRTLPLAAASIILGAGIAIQAQIFDLLIFSLSLITALLLQILSNLANDYGDAISGVDNGKRVGPLRAMQ SGAISQKSLKIAILLTTSLVVVSGITLLVIALGSNSTSWVVFLLLGLLAIVAAITYTMGKLHYGYRAMGDLAVFLFFGLV GVVGSYYLYGLTFSWSLLLPATSVGLLSAAVLNINNMRDIYTDKEAHKTTLVVLWGLKNAFIYHLSLIVGAFICAVYYFS QLENVQAWQFIFLLSFSPLIKSCLILKEAISKDIRDGQVFNDELKNTALSTFVFSLLFALVLI
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Escherichia coli, GI1790365, Length=303, Percent_Identity=44.8844884488449, Blast_Score=233, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33030; Mature: 32898
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISVWLSELRLRTLPLAAASIILGAGIAIQAQIFDLLIFSLSLITALLLQILSNLAND CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGDAISGVDNGKRVGPLRAMQSGAISQKSLKIAILLTTSLVVVSGITLLVIALGSNSTSW HHHHHCCCCCCCCCCHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHEEEEECCCCCHH VVFLLLGLLAIVAAITYTMGKLHYGYRAMGDLAVFLFFGLVGVVGSYYLYGLTFSWSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PATSVGLLSAAVLNINNMRDIYTDKEAHKTTLVVLWGLKNAFIYHLSLIVGAFICAVYYF HHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH SQLENVQAWQFIFLLSFSPLIKSCLILKEAISKDIRDGQVFNDELKNTALSTFVFSLLFA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LVLI HHHC >Mature Secondary Structure SNISVWLSELRLRTLPLAAASIILGAGIAIQAQIFDLLIFSLSLITALLLQILSNLAND CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGDAISGVDNGKRVGPLRAMQSGAISQKSLKIAILLTTSLVVVSGITLLVIALGSNSTSW HHHHHCCCCCCCCCCHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHEEEEECCCCCHH VVFLLLGLLAIVAAITYTMGKLHYGYRAMGDLAVFLFFGLVGVVGSYYLYGLTFSWSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PATSVGLLSAAVLNINNMRDIYTDKEAHKTTLVVLWGLKNAFIYHLSLIVGAFICAVYYF HHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH SQLENVQAWQFIFLLSFSPLIKSCLILKEAISKDIRDGQVFNDELKNTALSTFVFSLLFA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LVLI HHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]