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The map label for this gene is hupK [H]

Identifier: 119900087

GI number: 119900087

Start: 4156888

End: 4157994

Strand: Direct

Name: hupK [H]

Synonym: azo3798

Alternate gene names: 119900087

Gene position: 4156888-4157994 (Clockwise)

Preceding gene: 119900086

Following gene: 119900088

Centisome position: 94.99

GC content: 76.24

Gene sequence:

>1107_bases
ATGCTGGCCGGCACCGCCCTCCAGCTGCATGCCACCGTCGCCGGGGACGGGCGCCTCCATGCGACCGTCCGCAACCTGCG
GCCCGCGGCGGCCCGGCTGCTGGTCGGCCGCCGCGTAGATGAAGCCGTGGCGCTGGCGCCCAGGCTGTTCGCCCTGTGCG
GCTGCGCCCAGGGCGCGGCCGCGCGTCTCGCCTGTCGCGCTGCGGCGGGCGAAGCCGCGGCGCTTGACGAGGGCGACGAG
CGCCGTCTCGCCGCCGAGGCGGCGCACGAGCACCTGTGGCGGCTGCTGCTCGACTGGCCGGTGCTGTTCGGCGCGCCGCC
GCAGCGCCAGCGCTATGCCGACCTCCATCGCAGGCTGAGCACCGTACCGGACGCCACCAGCGCCGGTGCACTGGGCGAAG
AACTGCAGCGGCTCGCCACCGACGAACTCCTCGGCGGCACGCTCCCGCGCCTGCAGGACGCAGCCTCGGAGGACGCCGTG
CAAGCCAACCTCGACGCGGCCGGCACCGGTTTCGCGCGAGTGCTGGCGCAGACGATCGCGCTGGGCACCGCTACCGACGG
CGCCGCCACGCCGGTGCTCCCTCAGCGCAGCGCCGCGGCCTGGACCACCGCGCTGGGGGGCCTGCCGGACCCGCACTTCT
GCTCCGCCCCCACGGAGGGCAGCAACGCCGCGGAAACCGGCCCGCTCGCCCGTCACGCGCACCTGCCGGTCGTTGCGCTG
CTGCTCGCCCGCCACCGCCGCATCGCGGCACGCCTGCTGGCCAAGGTCATCGACGTGGCCGATTGCGGCGCCCGCCTTGC
CGGCGCCCCGGGCACGCCGCTGGCGGACGCCATTGCGCCGGCGCCCGGCCTGGGCCTCGCCTGTGTCGACACCGCGCGCG
GCACCTTGCTGCACGGCGTGCGGGTCGAGGCCGGGCGCATCGCCGACTACCGCATCTGCGCCCCGACCGACTGGCATTTC
CACCCCGGCGGCGCCTTCGTGGGCGAGGTCAAGGGCCGGCACGCCGCCGACGAGGCCGGCACCCGGCTGCGGCTGCACGC
ACTCGCGCTGTCGCTCGACCCCTGCGTGGCCTTCGAGCTGAGCGTGGAGGACAGCGTCCATGCATGA

Upstream 100 bases:

>100_bases
CGACGCCCGCGAGGCAGCCCGCCTCGCCGGCCTGCCTGCCGCGGCCGCCCCGGTCTCGCGGCGCGCCTTCCTGCGCGGCG
CACTCTTCGGCGGCCGCTGA

Downstream 100 bases:

>100_bases
GATGTCGCTCGCCGAGGGCATACGCGGCATCGTCGAAGACGTCGCGCGCGAGAACGGCGCGACACGGGTGGCGCGGGTGG
TGCTGGAAATCGGCGAACTC

Product: putative hydrogenase expression/formation protein HupK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MLAGTALQLHATVAGDGRLHATVRNLRPAAARLLVGRRVDEAVALAPRLFALCGCAQGAAARLACRAAAGEAAALDEGDE
RRLAAEAAHEHLWRLLLDWPVLFGAPPQRQRYADLHRRLSTVPDATSAGALGEELQRLATDELLGGTLPRLQDAASEDAV
QANLDAAGTGFARVLAQTIALGTATDGAATPVLPQRSAAAWTTALGGLPDPHFCSAPTEGSNAAETGPLARHAHLPVVAL
LLARHRRIAARLLAKVIDVADCGARLAGAPGTPLADAIAPAPGLGLACVDTARGTLLHGVRVEAGRIADYRICAPTDWHF
HPGGAFVGEVKGRHAADEAGTRLRLHALALSLDPCVAFELSVEDSVHA

Sequences:

>Translated_368_residues
MLAGTALQLHATVAGDGRLHATVRNLRPAAARLLVGRRVDEAVALAPRLFALCGCAQGAAARLACRAAAGEAAALDEGDE
RRLAAEAAHEHLWRLLLDWPVLFGAPPQRQRYADLHRRLSTVPDATSAGALGEELQRLATDELLGGTLPRLQDAASEDAV
QANLDAAGTGFARVLAQTIALGTATDGAATPVLPQRSAAAWTTALGGLPDPHFCSAPTEGSNAAETGPLARHAHLPVVAL
LLARHRRIAARLLAKVIDVADCGARLAGAPGTPLADAIAPAPGLGLACVDTARGTLLHGVRVEAGRIADYRICAPTDWHF
HPGGAFVGEVKGRHAADEAGTRLRLHALALSLDPCVAFELSVEDSVHA
>Mature_368_residues
MLAGTALQLHATVAGDGRLHATVRNLRPAAARLLVGRRVDEAVALAPRLFALCGCAQGAAARLACRAAAGEAAALDEGDE
RRLAAEAAHEHLWRLLLDWPVLFGAPPQRQRYADLHRRLSTVPDATSAGALGEELQRLATDELLGGTLPRLQDAASEDAV
QANLDAAGTGFARVLAQTIALGTATDGAATPVLPQRSAAAWTTALGGLPDPHFCSAPTEGSNAAETGPLARHAHLPVVAL
LLARHRRIAARLLAKVIDVADCGARLAGAPGTPLADAIAPAPGLGLACVDTARGTLLHGVRVEAGRIADYRICAPTDWHF
HPGGAFVGEVKGRHAADEAGTRLRLHALALSLDPCVAFELSVEDSVHA

Specific function: Unknown

COG id: COG0374

COG function: function code C; Ni,Fe-hydrogenase I large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38083; Mature: 38083

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGTALQLHATVAGDGRLHATVRNLRPAAARLLVGRRVDEAVALAPRLFALCGCAQGAA
CCCCCEEEEEEEEECCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ARLACRAAAGEAAALDEGDERRLAAEAAHEHLWRLLLDWPVLFGAPPQRQRYADLHRRLS
HHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TVPDATSAGALGEELQRLATDELLGGTLPRLQDAASEDAVQANLDAAGTGFARVLAQTIA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LGTATDGAATPVLPQRSAAAWTTALGGLPDPHFCSAPTEGSNAAETGPLARHAHLPVVAL
HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLARHRRIAARLLAKVIDVADCGARLAGAPGTPLADAIAPAPGLGLACVDTARGTLLHGV
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCCCCEEEEHHCCCCEEECE
RVEAGRIADYRICAPTDWHFHPGGAFVGEVKGRHAADEAGTRLRLHALALSLDPCVAFEL
EEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCEEEEEEEEEECCCCEEEEE
SVEDSVHA
ECCCCCCC
>Mature Secondary Structure
MLAGTALQLHATVAGDGRLHATVRNLRPAAARLLVGRRVDEAVALAPRLFALCGCAQGAA
CCCCCEEEEEEEEECCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ARLACRAAAGEAAALDEGDERRLAAEAAHEHLWRLLLDWPVLFGAPPQRQRYADLHRRLS
HHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TVPDATSAGALGEELQRLATDELLGGTLPRLQDAASEDAVQANLDAAGTGFARVLAQTIA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LGTATDGAATPVLPQRSAAAWTTALGGLPDPHFCSAPTEGSNAAETGPLARHAHLPVVAL
HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLARHRRIAARLLAKVIDVADCGARLAGAPGTPLADAIAPAPGLGLACVDTARGTLLHGV
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCCCCEEEEHHCCCCEEECE
RVEAGRIADYRICAPTDWHFHPGGAFVGEVKGRHAADEAGTRLRLHALALSLDPCVAFEL
EEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCEEEEEEEEEECCCCEEEEE
SVEDSVHA
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]