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The map label for this gene is hupJ [H]

Identifier: 119900086

GI number: 119900086

Start: 4156321

End: 4156887

Strand: Direct

Name: hupJ [H]

Synonym: azo3797

Alternate gene names: 119900086

Gene position: 4156321-4156887 (Clockwise)

Preceding gene: 119900085

Following gene: 119900087

Centisome position: 94.98

GC content: 74.07

Gene sequence:

>567_bases
ATGACCGCCGTCGCGCGCACCTTCCCTGCCACCGCGGAGCCTGCCGACGCGGCGGCAGCGCACGCCGCCCGCCTGCGCGC
GTGTTTTCAGCACATCGCGCGCACACGCATGGCAGGCCTGCCGATCTGCAACCCGGCGCTCGGCGTCGCAGTGCCGGCGC
TGCTGCCTTTCCAAGGCGAGTGGCTGGGCGCGCTGGTCACGCCGTGGGCGATCAGCCTGGTGCTGCTGCCGGGCGAGGGC
ACGCGCTTTCGCGCGATCGGCGTCGGCGACAGCCAGGACTGGGACTTCCCGTCCGGCCGCTACAGCTTCCTCGGCCACCA
GGAAGCGGGTCTCGGTGCGTACCAGACCTGTTCGCTCGCCTCGCCGGTGTTCGAATTCGCCGATCAGGCCGCCGCCGAAA
CCTTCGCGCTCGCCGCACTGGAAGCCTTGTTGCGGAACGAGGAGGACGGCGGCGCGGCGCGCGTGCACGACGCCCGCGAG
GCAGCCCGCCTCGCCGGCCTGCCTGCCGCGGCCGCCCCGGTCTCGCGGCGCGCCTTCCTGCGCGGCGCACTCTTCGGCGG
CCGCTGA

Upstream 100 bases:

>100_bases
AGGTGCCGGCGGGCACGCCCTTCGCCGCGCTGCCGGCGCACTGGTGCTGCCCCAACTGCGAAGCGCCGCGCCACAAGTTC
ATGGTCATCGCGGACGACTG

Downstream 100 bases:

>100_bases
ATGCTGGCCGGCACCGCCCTCCAGCTGCATGCCACCGTCGCCGGGGACGGGCGCCTCCATGCGACCGTCCGCAACCTGCG
GCCCGCGGCGGCCCGGCTGC

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTAVARTFPATAEPADAAAAHAARLRACFQHIARTRMAGLPICNPALGVAVPALLPFQGEWLGALVTPWAISLVLLPGEG
TRFRAIGVGDSQDWDFPSGRYSFLGHQEAGLGAYQTCSLASPVFEFADQAAAETFALAALEALLRNEEDGGAARVHDARE
AARLAGLPAAAAPVSRRAFLRGALFGGR

Sequences:

>Translated_188_residues
MTAVARTFPATAEPADAAAAHAARLRACFQHIARTRMAGLPICNPALGVAVPALLPFQGEWLGALVTPWAISLVLLPGEG
TRFRAIGVGDSQDWDFPSGRYSFLGHQEAGLGAYQTCSLASPVFEFADQAAAETFALAALEALLRNEEDGGAARVHDARE
AARLAGLPAAAAPVSRRAFLRGALFGGR
>Mature_187_residues
TAVARTFPATAEPADAAAAHAARLRACFQHIARTRMAGLPICNPALGVAVPALLPFQGEWLGALVTPWAISLVLLPGEGT
RFRAIGVGDSQDWDFPSGRYSFLGHQEAGLGAYQTCSLASPVFEFADQAAAETFALAALEALLRNEEDGGAARVHDAREA
ARLAGLPAAAAPVSRRAFLRGALFGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789366, Length=113, Percent_Identity=31.858407079646, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR018527 [H]

Pfam domain/function: PF00301 Rubredoxin [H]

EC number: NA

Molecular weight: Translated: 19623; Mature: 19492

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVARTFPATAEPADAAAAHAARLRACFQHIARTRMAGLPICNPALGVAVPALLPFQGE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
WLGALVTPWAISLVLLPGEGTRFRAIGVGDSQDWDFPSGRYSFLGHQEAGLGAYQTCSLA
HHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
SPVFEFADQAAAETFALAALEALLRNEEDGGAARVHDAREAARLAGLPAAAAPVSRRAFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHCHHHHHHHH
RGALFGGR
HHHHCCCC
>Mature Secondary Structure 
TAVARTFPATAEPADAAAAHAARLRACFQHIARTRMAGLPICNPALGVAVPALLPFQGE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
WLGALVTPWAISLVLLPGEGTRFRAIGVGDSQDWDFPSGRYSFLGHQEAGLGAYQTCSLA
HHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
SPVFEFADQAAAETFALAALEALLRNEEDGGAARVHDAREAARLAGLPAAAAPVSRRAFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHCHHHHHHHH
RGALFGGR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190; 2007559 [H]