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The map label for this gene is yqgF [C]

Identifier: 119899749

GI number: 119899749

Start: 3798430

End: 3798900

Strand: Direct

Name: yqgF [C]

Synonym: azo3460

Alternate gene names: 119899749

Gene position: 3798430-3798900 (Clockwise)

Preceding gene: 119899748

Following gene: 119899750

Centisome position: 86.8

GC content: 68.37

Gene sequence:

>471_bases
ATGCCTGAAGCCGCGGCGGCTTCGGCCGCCGGATTGCCGGCGCGCGGCACCCTTCTCGCGTTCGACTTCGGTCTCGCCCG
CATCGGCGTTGCGGTGGGCGAACTGGAAACCCGGCACGCCAACCCGCTGCTTACGGTGCACGAAGAAGCCAACGCGGCGC
GCTTCGCGATCATCGCCCGCCTGCTGGACGAATGGAAGCCGGTTGCGCTGGTCGTCGGGCTGCCGGGCCATCTCGATGGT
CGCGAACATGAACTCGCGCCGCGCTGCCGCCGGTTCGCCAACCAGTTGCACGGCCGCTTCGGCATCCCGGTGCATCTGGT
GGACGAAAGACTGAGTTCCGCGGCCGCGGAACGCCAGCTGCACGACGCGGGACTGAGCGGCTGGCAAGCGCGCAAGCCGG
TACTCGACGCGGTGGCGGCGCAACTCATCCTGCAACACTTCCTGGACCTTAACGCCCATGCACCTGCCTGA

Upstream 100 bases:

>100_bases
GACCTCGGCATCATCTTCGACCTGCCGCCGGAGGAGCGCCTCGTCGCGGCCATGCAGAAACTCGGCGTCGACTTCGCCAA
GCTCAGCGAGGTCGCGGGGC

Downstream 100 bases:

>100_bases
CGCCGAGGCGCTGGTACGGCAGCTCGCCGACCAGATCCGCCCGCAGCTCACTGCCGACACCGCGATGGTCGGCATCCACA
CCGGCGGCCTGTGGCTGGCC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MPEAAAASAAGLPARGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGLPGHLDG
REHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQARKPVLDAVAAQLILQHFLDLNAHAPA

Sequences:

>Translated_156_residues
MPEAAAASAAGLPARGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGLPGHLDG
REHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQARKPVLDAVAAQLILQHFLDLNAHAPA
>Mature_155_residues
PEAAAASAAGLPARGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGLPGHLDGR
EHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQARKPVLDAVAAQLILQHFLDLNAHAPA

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=135, Percent_Identity=45.9259259259259, Blast_Score=116, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_AZOSB (A1KB70)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_934962.1
- ProteinModelPortal:   A1KB70
- SMR:   A1KB70
- STRING:   A1KB70
- GeneID:   4608297
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo3460
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   ACVILEQ
- PhylomeDB:   A1KB70
- ProtClustDB:   PRK00109
- BioCyc:   ASP62928:AZO3460-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 16725; Mature: 16594

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAAAASAAGLPARGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIAR
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
LLDEWKPVALVVGLPGHLDGREHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQL
HHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HDAGLSGWQARKPVLDAVAAQLILQHFLDLNAHAPA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PEAAAASAAGLPARGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIAR
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
LLDEWKPVALVVGLPGHLDGREHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQL
HHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HDAGLSGWQARKPVLDAVAAQLILQHFLDLNAHAPA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA