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The map label for this gene is algH [C]

Identifier: 119899748

GI number: 119899748

Start: 3797871

End: 3798437

Strand: Direct

Name: algH [C]

Synonym: azo3459

Alternate gene names: 119899748

Gene position: 3797871-3798437 (Clockwise)

Preceding gene: 119899746

Following gene: 119899749

Centisome position: 86.79

GC content: 67.02

Gene sequence:

>567_bases
ATGGATACCGGATCGGCCAACCTCACGCATCACTTCCTGATCGCCATGCCGAACATGGCCGATCCCCATTTCGCGCGCAC
CCTGACCTACATCGCCGAACACAGCGACCAGGGCGCCCTCGGGCTGATCATCAACCGCCCGCTGGACATGACACTGGAAA
CCCTGTTCGAGCGCGTGGAACTGCCGCTGGAAGCCGACGGCTTTGCCGGCCAGCCGGTGTATTTCGGCGGGCCGGTCCAG
ACCGACCGCGGCTTCGTGCTGCACCGCCCGGCGGGCGACTGGCACTCCACGCTGCGGGTCAACGACGACATCGCGCTTAC
CAGCAGCCGCGACATCCTGCAGTCCATCGGCAGCAGCGGCGAACCGCAGGAAGTGCTGATCAGCCTGGGCTACGCCGGGT
GGACCGCAGGTCAGCTCGAGGACGAACTGGCGCAGAACGCCTGGCTCACCGTCCCCGCCGACCTCGGCATCATCTTCGAC
CTGCCGCCGGAGGAGCGCCTCGTCGCGGCCATGCAGAAACTCGGCGTCGACTTCGCCAAGCTCAGCGAGGTCGCGGGGCA
TGCCTGA

Upstream 100 bases:

>100_bases
ATCGCCCAGCGGCAGAACGCACGCCGCAGACACCGGCCGGAACGGCCGTGGCGGACAAAGCGGCCTCGCGGGGCGGCGCA
TCAGCGCGTAAAATGCAGCC

Downstream 100 bases:

>100_bases
AGCCGCGGCGGCTTCGGCCGCCGGATTGCCGGCGCGCGGCACCCTTCTCGCGTTCGACTTCGGTCTCGCCCGCATCGGCG
TTGCGGTGGGCGAACTGGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDTGSANLTHHFLIAMPNMADPHFARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVELPLEADGFAGQPVYFGGPVQ
TDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSGEPQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGIIFD
LPPEERLVAAMQKLGVDFAKLSEVAGHA

Sequences:

>Translated_188_residues
MDTGSANLTHHFLIAMPNMADPHFARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVELPLEADGFAGQPVYFGGPVQ
TDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSGEPQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGIIFD
LPPEERLVAAMQKLGVDFAKLSEVAGHA
>Mature_188_residues
MDTGSANLTHHFLIAMPNMADPHFARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVELPLEADGFAGQPVYFGGPVQ
TDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSGEPQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGIIFD
LPPEERLVAAMQKLGVDFAKLSEVAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=186, Percent_Identity=45.1612903225806, Blast_Score=185, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3459_AZOSB (A1KB69)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_934961.1
- ProteinModelPortal:   A1KB69
- SMR:   A1KB69
- STRING:   A1KB69
- GeneID:   4609553
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo3459
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- PhylomeDB:   A1KB69
- ProtClustDB:   CLSK766460
- BioCyc:   ASP62928:AZO3459-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20403; Mature: 20403

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGSANLTHHFLIAMPNMADPHFARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHC
LPLEADGFAGQPVYFGGPVQTDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSG
CCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCEEECCCHHHHHHCCCCC
EPQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGIIFDLPPEERLVAAMQKLGVDFAK
CCHHEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHCCCHHH
LSEVAGHA
HHHHHCCC
>Mature Secondary Structure
MDTGSANLTHHFLIAMPNMADPHFARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVE
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHC
LPLEADGFAGQPVYFGGPVQTDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSG
CCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCEEECCCHHHHHHCCCCC
EPQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGIIFDLPPEERLVAAMQKLGVDFAK
CCHHEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHCCCHHH
LSEVAGHA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA