Definition | Azoarcus sp. BH72 chromosome, complete genome. |
---|---|
Accession | NC_008702 |
Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is pyrR [H]
Identifier: 119899750
GI number: 119899750
Start: 3798887
End: 3799387
Strand: Direct
Name: pyrR [H]
Synonym: azo3461
Alternate gene names: 119899750
Gene position: 3798887-3799387 (Clockwise)
Preceding gene: 119899749
Following gene: 119899751
Centisome position: 86.81
GC content: 71.06
Gene sequence:
>501_bases ATGCACCTGCCTGACGCCGAGGCGCTGGTACGGCAGCTCGCCGACCAGATCCGCCCGCAGCTCACTGCCGACACCGCGAT GGTCGGCATCCACACCGGCGGCCTGTGGCTGGCCGAGCGGCTGCACGCCGAACTCGGAATCAGTCAGCCGCTGGGGGCCA TCGACGTGTCCTTCTACCGCGACGACTACTCCGCGCGCGGCCTGCACCCGCAGCCGCAGCGCACCGAAATCGCGTTCTCG GTGGAAGGGCGGCCGGTGATCCTGGTGGACGACGTGCTCTACACCGGCCGCACCACGCGGGCCGCGCTCAACGAACTGTT CGACTTCGGGCGCCCGGCGCGCGTCGATCTCGCGGTGCTGGTCGACCGCGGCGGGCGCGAGCTGCCGATCGCGGCGCGCT ACTGCGCCCACACCCTGCCCGAAGCGCTGCCCGCCTCGCAGAACCTGCAACTCGAGCGCTCGCCCGAAGGCGCTCTCGAC CTGAGGCTGATCGATGCGTAA
Upstream 100 bases:
>100_bases CTGCACGACGCGGGACTGAGCGGCTGGCAAGCGCGCAAGCCGGTACTCGACGCGGTGGCGGCGCAACTCATCCTGCAACA CTTCCTGGACCTTAACGCCC
Downstream 100 bases:
>100_bases TCCCCAGCTCAACGAACACGGCGAACTGCAACACCTGCTGACGCTGGACGGACTGCCGCGCCAGATCATTACCGCCATCC TCGACACCGCTGCGCCCTTC
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MHLPDAEALVRQLADQIRPQLTADTAMVGIHTGGLWLAERLHAELGISQPLGAIDVSFYRDDYSARGLHPQPQRTEIAFS VEGRPVILVDDVLYTGRTTRAALNELFDFGRPARVDLAVLVDRGGRELPIAARYCAHTLPEALPASQNLQLERSPEGALD LRLIDA
Sequences:
>Translated_166_residues MHLPDAEALVRQLADQIRPQLTADTAMVGIHTGGLWLAERLHAELGISQPLGAIDVSFYRDDYSARGLHPQPQRTEIAFS VEGRPVILVDDVLYTGRTTRAALNELFDFGRPARVDLAVLVDRGGRELPIAARYCAHTLPEALPASQNLQLERSPEGALD LRLIDA >Mature_166_residues MHLPDAEALVRQLADQIRPQLTADTAMVGIHTGGLWLAERLHAELGISQPLGAIDVSFYRDDYSARGLHPQPQRTEIAFS VEGRPVILVDDVLYTGRTTRAALNELFDFGRPARVDLAVLVDRGGRELPIAARYCAHTLPEALPASQNLQLERSPEGALD LRLIDA
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 18226; Mature: 18226
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPDAEALVRQLADQIRPQLTADTAMVGIHTGGLWLAERLHAELGISQPLGAIDVSFYR CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEC DDYSARGLHPQPQRTEIAFSVEGRPVILVDDVLYTGRTTRAALNELFDFGRPARVDLAVL CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE VDRGGRELPIAARYCAHTLPEALPASQNLQLERSPEGALDLRLIDA EECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECC >Mature Secondary Structure MHLPDAEALVRQLADQIRPQLTADTAMVGIHTGGLWLAERLHAELGISQPLGAIDVSFYR CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEC DDYSARGLHPQPQRTEIAFSVEGRPVILVDDVLYTGRTTRAALNELFDFGRPARVDLAVL CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE VDRGGRELPIAARYCAHTLPEALPASQNLQLERSPEGALDLRLIDA EECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA