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The map label for this gene is ycdT [C]

Identifier: 119867190

GI number: 119867190

Start: 1223710

End: 1224837

Strand: Reverse

Name: ycdT [C]

Synonym: Mkms_1139

Alternate gene names: 119867190

Gene position: 1224837-1223710 (Counterclockwise)

Preceding gene: 119867192

Following gene: 119867189

Centisome position: 21.35

GC content: 69.24

Gene sequence:

>1128_bases
ATGTTCCAGGCGATGCGGCAGTACTGGCGCCAGCCGGAACATTTCTATTGGCTGACCTCCTTCCTGGCCGCGCGGGAGGC
GCAGTCGGCGACGTGCCGGCTGATCGCGATGTTCGTCGCGACGCTCGGGGCGGTGCCGCTGGCGATGCAGTGGAGCGACG
CCGGCCCGAACACCACCTTCGAGCGCGGTGTCGGCGCCGCGGTCACGCTCAGCTGCCTGGTGATCGCGGGGTTCTGGTTG
CGGCGCCGGTGGCCGTCGCGGCGGCAATCCGGCGTGTTCGTGGCGGTGACGGCCGTCATCATCGCCGCCGGCTCCCTGAT
CATGTCCGACCCCGAGGCCGGTCTGCTGCTGGCGACGGGCTTCGCGGTGTTGGGGGCCTACATCGCGCTGTTCCACACCG
CCCACTACATCGTCGGTGTGTTCGCGCTCTCCGAGTTCACCGGCGTCGTGCTGGCGTTCCGGCTGGCCGAGACGGCGGGT
GCGGTGTGGGCGCTGACGGCGCTCACCATCGTCATGACGGTCACCGTGGCGGTGCCGTTCGCCTGCCACCTGCTGCTCTA
CGCCGTCGACATCGACGTGGACAACGCCGACATCGACCCGCTGACCGGGTTGTTGAACCGTGAGGCGTTCTACCGCGCCG
CCGGCCACGTGGTCTCCCGCAGCCGTGACGACGATCAGCGCCTGGTGTTGGTGGTCATCAACCTCGACAACATGCGACTG
CTGTGTGAGACCGACGGTGAGCTGGCGTGTGAGCGGGCCCGCGTGGCGATCGGCCAGACCCTGCGTGAGACGACCCGCCA
CAACGCGTTCGTCGCCCACACCGGTGACGACGAGTACCTGATCGCCGACACGTTCGCCACGACGGATTCGTTCCCGCTGG
TCGAACGGGTGCGGAAGGCGATTGCCGCGACGCCGCCACGGGTGACGGCGAGCATGGGTGTGGTCAGTACACCGATGCGC
GGTTTGGGTGCCTGCCCGCCGACGGAGCTGCTCGACGAGCTGATCACGGTCGCGACGATGGCGATGTACGACGCCCGCCG
CGCCGGGGGCAACCAGGCCCGTTACGTCTCGTGTGACCGGCCGGCCGTCCTCGACAACGCCCGGCCGCTGGGCACCGACG
ACCTCTAG

Upstream 100 bases:

>100_bases
GGGAGCGTAACCGCGCTCCGCGCACCTCCCTGACGCCGATTTTCCGGCCGCCATGTCGGTGCTCGGGCATACAGTTGACG
CAGCAGTGGGAGGTGTCACG

Downstream 100 bases:

>100_bases
ACGGTATGGGTGACCGTCGGCGTTGAGTCGGGGGTTGCGGGCCGGGGCCCCACTCACCCATGTTCGTGGGTTACCGAGTA
GGGAGTCGCCTGCCCGGTCT

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MFQAMRQYWRQPEHFYWLTSFLAAREAQSATCRLIAMFVATLGAVPLAMQWSDAGPNTTFERGVGAAVTLSCLVIAGFWL
RRRWPSRRQSGVFVAVTAVIIAAGSLIMSDPEAGLLLATGFAVLGAYIALFHTAHYIVGVFALSEFTGVVLAFRLAETAG
AVWALTALTIVMTVTVAVPFACHLLLYAVDIDVDNADIDPLTGLLNREAFYRAAGHVVSRSRDDDQRLVLVVINLDNMRL
LCETDGELACERARVAIGQTLRETTRHNAFVAHTGDDEYLIADTFATTDSFPLVERVRKAIAATPPRVTASMGVVSTPMR
GLGACPPTELLDELITVATMAMYDARRAGGNQARYVSCDRPAVLDNARPLGTDDL

Sequences:

>Translated_375_residues
MFQAMRQYWRQPEHFYWLTSFLAAREAQSATCRLIAMFVATLGAVPLAMQWSDAGPNTTFERGVGAAVTLSCLVIAGFWL
RRRWPSRRQSGVFVAVTAVIIAAGSLIMSDPEAGLLLATGFAVLGAYIALFHTAHYIVGVFALSEFTGVVLAFRLAETAG
AVWALTALTIVMTVTVAVPFACHLLLYAVDIDVDNADIDPLTGLLNREAFYRAAGHVVSRSRDDDQRLVLVVINLDNMRL
LCETDGELACERARVAIGQTLRETTRHNAFVAHTGDDEYLIADTFATTDSFPLVERVRKAIAATPPRVTASMGVVSTPMR
GLGACPPTELLDELITVATMAMYDARRAGGNQARYVSCDRPAVLDNARPLGTDDL
>Mature_375_residues
MFQAMRQYWRQPEHFYWLTSFLAAREAQSATCRLIAMFVATLGAVPLAMQWSDAGPNTTFERGVGAAVTLSCLVIAGFWL
RRRWPSRRQSGVFVAVTAVIIAAGSLIMSDPEAGLLLATGFAVLGAYIALFHTAHYIVGVFALSEFTGVVLAFRLAETAG
AVWALTALTIVMTVTVAVPFACHLLLYAVDIDVDNADIDPLTGLLNREAFYRAAGHVVSRSRDDDQRLVLVVINLDNMRL
LCETDGELACERARVAIGQTLRETTRHNAFVAHTGDDEYLIADTFATTDSFPLVERVRKAIAATPPRVTASMGVVSTPMR
GLGACPPTELLDELITVATMAMYDARRAGGNQARYVSCDRPAVLDNARPLGTDDL

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40732; Mature: 40732

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQAMRQYWRQPEHFYWLTSFLAAREAQSATCRLIAMFVATLGAVPLAMQWSDAGPNTTF
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
ERGVGAAVTLSCLVIAGFWLRRRWPSRRQSGVFVAVTAVIIAAGSLIMSDPEAGLLLATG
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCCEECCCCCCEEHHHH
FAVLGAYIALFHTAHYIVGVFALSEFTGVVLAFRLAETAGAVWALTALTIVMTVTVAVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACHLLLYAVDIDVDNADIDPLTGLLNREAFYRAAGHVVSRSRDDDQRLVLVVINLDNMRL
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE
LCETDGELACERARVAIGQTLRETTRHNAFVAHTGDDEYLIADTFATTDSFPLVERVRKA
EEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH
IAATPPRVTASMGVVSTPMRGLGACPPTELLDELITVATMAMYDARRAGGNQARYVSCDR
HHCCCCCHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
PAVLDNARPLGTDDL
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MFQAMRQYWRQPEHFYWLTSFLAAREAQSATCRLIAMFVATLGAVPLAMQWSDAGPNTTF
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
ERGVGAAVTLSCLVIAGFWLRRRWPSRRQSGVFVAVTAVIIAAGSLIMSDPEAGLLLATG
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCCEECCCCCCEEHHHH
FAVLGAYIALFHTAHYIVGVFALSEFTGVVLAFRLAETAGAVWALTALTIVMTVTVAVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACHLLLYAVDIDVDNADIDPLTGLLNREAFYRAAGHVVSRSRDDDQRLVLVVINLDNMRL
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE
LCETDGELACERARVAIGQTLRETTRHNAFVAHTGDDEYLIADTFATTDSFPLVERVRKA
EEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH
IAATPPRVTASMGVVSTPMRGLGACPPTELLDELITVATMAMYDARRAGGNQARYVSCDR
HHCCCCCHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
PAVLDNARPLGTDDL
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA