| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867189
Identifier: 119867189
GI number: 119867189
Start: 1222494
End: 1223585
Strand: Reverse
Name: 119867189
Synonym: Mkms_1138
Alternate gene names: NA
Gene position: 1223585-1222494 (Counterclockwise)
Preceding gene: 119867190
Following gene: 119867186
Centisome position: 21.33
GC content: 67.12
Gene sequence:
>1092_bases GTGTTTACAGAGCGTACGAGTGTGGGACTGGACGTGCACGCACGTTCGGTAGCAGCAGCTGCCATCGACGGCGTGACCGG TGAGGTTCAGCAGACTCGCCTGACCCCATCCCATGAGCACATCCGGTCGTGGATATCGGGGCTGGCGGGCCCGGTGGCGG TGGCCTACGAGGCTGGTCCCACCGGTTTCGGCTTGCAGCGGTCGTTGACGGAGGCCGGGATCCGCTGCGTCGTGGTGGCG CCGTCGAAACTGCAGAAGCCCGCTGGAGATCGAGTGAAGACCGATGCCCGCGACGCCCTGCACCTGTGCCGGTTGTTGCG GCTGGATGAGATCACGTCGGTGTCGATTCCGAGCGTGGCTCAGGAAGCGGCTCGTGACTTGGTGCGTGCCCGCGAGGACT GCCGCGGCGACCTGATGCGGGCTCGGCATCGCCTGTCCAAGCTGCTGTTGCGCCACGGCATCGTGTACTACGGCGGGCAG GCCTGGACCGGTGCCCATGATCAGTGGCTGCGCACCGTCGCCGCGCCGCAGCTCATGGCGCCGGCGACGCGGATGGCCTT TGACGCCGACTATGACCACGTGTTGACAATGCAGGCCCGGCGGCGACGGCTGGACGCAGCGATCGAGGAGAGGGCCGCCG ATAGTGAGTTCACCGCGATCGTGCGGCGGGTGTCGTGTCTGCGGGGGGTGAACACGTTGACCGGGTTTGCGTTGGCAGTC GAAATCGGTGATTGGAACCGGTTCACCGGCAACACGATTGGTTCCTTCGTCGGGCTGGTTCCCTCGGAGTTTTCGTCGGG CTCCTCGCGGGCTCAAGGTCCGATCACCAAGACCGGCAACACCCATGTCCGGCGGCTGCTGGTCGAGGCGGCGTGGCATC ACAAGCCGCGATATCGGGTCGGTACGGTGATGCGTTCGCGGTGGGATCGGGCATCTGCGGCGGCCCGCGCCCGCGGGGAC GAAGGCAACCGCCGCCTGCATGGCAGGTGGGTGGGCTTCCTGGAGCGACGCAAACGACCCGTGACGGCCAATGTCGCGGT CGCGCGTGAGCTGGCCGGCTGGTGCTGGTCGCTGGCCGTCATGGACGACTGA
Upstream 100 bases:
>100_bases GAGTCGGGGGTTGCGGGCCGGGGCCCCACTCACCCATGTTCGTGGGTTACCGAGTAGGGAGTCGCCTGCCCGGTCTATCC GACAGTGGTGGGAGGCCCCG
Downstream 100 bases:
>100_bases CCGCCACCTGATCTGCTTCCTCACAAGGTCCGTGGTGGCAGCGCGTGGATCGACCCGCGACACACCTATGAGCAGCCCAC GCGGGTGACGCTCGATTCTA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MFTERTSVGLDVHARSVAAAAIDGVTGEVQQTRLTPSHEHIRSWISGLAGPVAVAYEAGPTGFGLQRSLTEAGIRCVVVA PSKLQKPAGDRVKTDARDALHLCRLLRLDEITSVSIPSVAQEAARDLVRAREDCRGDLMRARHRLSKLLLRHGIVYYGGQ AWTGAHDQWLRTVAAPQLMAPATRMAFDADYDHVLTMQARRRRLDAAIEERAADSEFTAIVRRVSCLRGVNTLTGFALAV EIGDWNRFTGNTIGSFVGLVPSEFSSGSSRAQGPITKTGNTHVRRLLVEAAWHHKPRYRVGTVMRSRWDRASAAARARGD EGNRRLHGRWVGFLERRKRPVTANVAVARELAGWCWSLAVMDD
Sequences:
>Translated_363_residues MFTERTSVGLDVHARSVAAAAIDGVTGEVQQTRLTPSHEHIRSWISGLAGPVAVAYEAGPTGFGLQRSLTEAGIRCVVVA PSKLQKPAGDRVKTDARDALHLCRLLRLDEITSVSIPSVAQEAARDLVRAREDCRGDLMRARHRLSKLLLRHGIVYYGGQ AWTGAHDQWLRTVAAPQLMAPATRMAFDADYDHVLTMQARRRRLDAAIEERAADSEFTAIVRRVSCLRGVNTLTGFALAV EIGDWNRFTGNTIGSFVGLVPSEFSSGSSRAQGPITKTGNTHVRRLLVEAAWHHKPRYRVGTVMRSRWDRASAAARARGD EGNRRLHGRWVGFLERRKRPVTANVAVARELAGWCWSLAVMDD >Mature_363_residues MFTERTSVGLDVHARSVAAAAIDGVTGEVQQTRLTPSHEHIRSWISGLAGPVAVAYEAGPTGFGLQRSLTEAGIRCVVVA PSKLQKPAGDRVKTDARDALHLCRLLRLDEITSVSIPSVAQEAARDLVRAREDCRGDLMRARHRLSKLLLRHGIVYYGGQ AWTGAHDQWLRTVAAPQLMAPATRMAFDADYDHVLTMQARRRRLDAAIEERAADSEFTAIVRRVSCLRGVNTLTGFALAV EIGDWNRFTGNTIGSFVGLVPSEFSSGSSRAQGPITKTGNTHVRRLLVEAAWHHKPRYRVGTVMRSRWDRASAAARARGD EGNRRLHGRWVGFLERRKRPVTANVAVARELAGWCWSLAVMDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 40027; Mature: 40027
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTERTSVGLDVHARSVAAAAIDGVTGEVQQTRLTPSHEHIRSWISGLAGPVAVAYEAGP CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCC TGFGLQRSLTEAGIRCVVVAPSKLQKPAGDRVKTDARDALHLCRLLRLDEITSVSIPSVA CCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH QEAARDLVRAREDCRGDLMRARHRLSKLLLRHGIVYYGGQAWTGAHDQWLRTVAAPQLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCHHHHHHHHHCCHHHC PATRMAFDADYDHVLTMQARRRRLDAAIEERAADSEFTAIVRRVSCLRGVNTLTGFALAV CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCEEEEE EIGDWNRFTGNTIGSFVGLVPSEFSSGSSRAQGPITKTGNTHVRRLLVEAAWHHKPRYRV EECCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH GTVMRSRWDRASAAARARGDEGNRRLHGRWVGFLERRKRPVTANVAVARELAGWCWSLAV HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEE MDD ECC >Mature Secondary Structure MFTERTSVGLDVHARSVAAAAIDGVTGEVQQTRLTPSHEHIRSWISGLAGPVAVAYEAGP CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCC TGFGLQRSLTEAGIRCVVVAPSKLQKPAGDRVKTDARDALHLCRLLRLDEITSVSIPSVA CCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH QEAARDLVRAREDCRGDLMRARHRLSKLLLRHGIVYYGGQAWTGAHDQWLRTVAAPQLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCHHHHHHHHHCCHHHC PATRMAFDADYDHVLTMQARRRRLDAAIEERAADSEFTAIVRRVSCLRGVNTLTGFALAV CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCEEEEE EIGDWNRFTGNTIGSFVGLVPSEFSSGSSRAQGPITKTGNTHVRRLLVEAAWHHKPRYRV EECCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH GTVMRSRWDRASAAARARGDEGNRRLHGRWVGFLERRKRPVTANVAVARELAGWCWSLAV HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEE MDD ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]